| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2674 |
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| Symbol | |
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| ID | 5663067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3257320 |
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| End bp | 3258327 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237313 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001502529 |
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| Protein GI | 157962495 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0916026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAC TCGATATTCG TAATCTCACC ATTGAACTCG ATACCCCCCA TGGACGAGTC
AAGGCGCTAG AACGTGTAAG CTTAACCATT AATCCTGGTG AACTGCATGG TCTAGTGGGT
GAATCAGGTT CAGGCCGTAC GCTATTAGCC CGTGCTATTT TAGGTGTGCC GGGTCATAAC
TGGACAATTA CCGCCGATCG CATGATGTGG GACGGTCAAA ATTTAATGGA TATGTCGGCT
AAGCAGCGAC GTAACTTAAT GGGCAGTGAA ATAGCCGTTA TTTTCCAAGA TCCTACAGGC
AGCTTAGATC CAGCTATCAC AGTTGGCAGC CAGCTTATCG AAGCTATGCC TAAAGATAAA
AAAATCTCAT TTTGGAAACG TAACAAGGCT CGAAAAGCTG TGGCTCAAAA GTGGCTGCAT
AAGGTCGGTA TCAAGAACAC TGAAGAAGTA ATGAGCAGTT ACGCGTGGGA GCTCTCCGCT
GGTGAATGCC AGAAAGTAAT GATTGCCATG GCCATTGCCA ATCAGCCACG CCTGTTGATT
GCCGACGAGC CAACCGACTC GATGGAACTC AGTACTCAGG CACAGATCTT TAGGCTGCTG
GGTAAACTTA ACCAGCTACA CAGCGTATCA ATTTTGTTGA TTAGCCATGA ACTAGAAACC
TTATCAGGTT GGTGCGACCA ACTCACCGTT TTATATTGCG GCCAAGTCAT GGAGTCCGGT
CCAACGGCCG AAGTGCTTGA ACAACCGTTT CACCCCTATA CCAAAGCATT ACTGGATAAT
ATGCCTGACT ACTCAGGCCG ACTTACCCAT AAATCGGTGA TGCAAACCTT GCCAGGATCA
GCACCAGCTC TGCAGCATCT CCCTATCGGC TGCCGCCTGG GTCCCCGCTG TCCACAGGCG
CAAAAACAAT GCGTCAGTAA ACCAAGCCTA TGCCATAAGA AAGGCCGCTA TTTTGCTTGC
CATTTCCCAT ACAACAGTGA GCCATGTAAT GACGACTCCA CTTCTTAA
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| Protein sequence | MPLLDIRNLT IELDTPHGRV KALERVSLTI NPGELHGLVG ESGSGRTLLA RAILGVPGHN
WTITADRMMW DGQNLMDMSA KQRRNLMGSE IAVIFQDPTG SLDPAITVGS QLIEAMPKDK
KISFWKRNKA RKAVAQKWLH KVGIKNTEEV MSSYAWELSA GECQKVMIAM AIANQPRLLI
ADEPTDSMEL STQAQIFRLL GKLNQLHSVS ILLISHELET LSGWCDQLTV LYCGQVMESG
PTAEVLEQPF HPYTKALLDN MPDYSGRLTH KSVMQTLPGS APALQHLPIG CRLGPRCPQA
QKQCVSKPSL CHKKGRYFAC HFPYNSEPCN DDSTS
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