Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2654 |
Symbol | |
ID | 5663047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3233401 |
End bp | 3234612 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641237292 |
Product | porin |
Protein accession | YP_001502509 |
Protein GI | 157962475 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.157647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA CTCTAGTAGC ATCGGCTTTA GCCGCAGTGA TATTTGTACC AACAGCATCA GCAATTGAAA TTTATAAAGA TGATAAAAAT GCAGTAGAAA TTGGTGGTTA TGTTGATGCT CGCATCATCA ATACTCAAGG TGCTACAGAA GTGGTTAACG GCGCTTCACG TATTAATTTC GGTTTTACTC GCCAGATGAG CGACGGCTGG AAAGCTTATA CTAAGCTAGA GTGGGGCGTA AACCCATTCG GTAATACCGA CATCGTTTAC AACAGCGACA GTACATTAGA ATCTCAAAGC GGTGACTTCT TAAATAACCG TTTAGGCTAT GTAGGTCTTG CACACGACAC ATATGGTTCA ATCACTATTG GTAAGCAATG GGGCGCATGG TATGACGTAG TTTATAACAC TAACTATGGC TTCGTATGGG ATGGTAACGC ATCAGGTACT TACACTTACA ATAAGGCTGA TGGTGCTGTA AACGGTACTG GCCGTGGTGA CAAAACGGTT CAATACCGTA ATGTATTCGG TGATTTCAGC TTCGCAGTTC AGGCTCAGCT TAAGCAAGAT AGTTTTGATA TAAACGAAAC TGCCACGGGT GCAAGCACTT TGTTCCCATC AACAGCTAAA GTTGCTGGTG TTAATAATTC AAATGCAGTA ACAACAGTTG AATATAACAA CACTTATGGC GGTTCTGCTA CGTACAACGT AACTGAAAAC TTAGTGGTAA CTGCAGGTTT TAACTTTGGC GAGTTCGAAG CCACTACTTC TGCTGGTAAG CGTCTAACTG AAACTGACTC TATCTACGGT CTAGGTGCTA GCTGGGGTAA CTGGGGCGGT GAAGGTGTTT ACGCTGCATT CAACGTTAAC AAGCAAGAGT TCCACGATAC TGATAACCTA AACCGTATGA TCCAAGATGC ATGGGGTCTA GAATCAATTG CTTCTTACAA GTTCGATAAC GGTATCCGTA CTTTCGTTTC TTATAACATC CTAGAAGCAG GCGACGAATA CGAAGCAGCT TACAATGGTG ATGTATTCAA GCGTCAGTTT GCAGTTGCTG GTGTTCACTA TGTTTGGGAC TCAAACACTG TTCTTTATCT AGAAGGTCGT AAAGATTTTA GTGATTTCAC TAGCGCAGAT AAAGTACAGC AAGCTGCGAT GGAAGTTTCT GAAGATGACG GTATCGCAAT TGGTATCCGT TACACACTTT AA
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Protein sequence | MKKTLVASAL AAVIFVPTAS AIEIYKDDKN AVEIGGYVDA RIINTQGATE VVNGASRINF GFTRQMSDGW KAYTKLEWGV NPFGNTDIVY NSDSTLESQS GDFLNNRLGY VGLAHDTYGS ITIGKQWGAW YDVVYNTNYG FVWDGNASGT YTYNKADGAV NGTGRGDKTV QYRNVFGDFS FAVQAQLKQD SFDINETATG ASTLFPSTAK VAGVNNSNAV TTVEYNNTYG GSATYNVTEN LVVTAGFNFG EFEATTSAGK RLTETDSIYG LGASWGNWGG EGVYAAFNVN KQEFHDTDNL NRMIQDAWGL ESIASYKFDN GIRTFVSYNI LEAGDEYEAA YNGDVFKRQF AVAGVHYVWD SNTVLYLEGR KDFSDFTSAD KVQQAAMEVS EDDGIAIGIR YTL
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