Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2652 |
Symbol | |
ID | 5663045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3228160 |
End bp | 3228942 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641237290 |
Product | hypothetical protein |
Protein accession | YP_001502507 |
Protein GI | 157962473 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00434013 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAGG TAAGCAATAA AACAAAAATC GCTACAGCGC TCATTGGCGC ACTAGCCTTA GCAGGCAGCA ACTTAGTGAT TGCCGATCCT CTTTCTGACG CTCAGAAAGC TGACGCTAAA ATTCACGCTG AAGCTGCAAC GTCTCAGAAG AAAGTTGATA AGTATTTTGA CCAAGCTCAG GATATGTTGT TCGAGTATGG GTCAGTTGCT GATGAACGTG AATCACTAAA ATCTTATAAC GACTACGTAG CAGGTCTGGT TGCAGATCAA GAAGCTACCA TGAAATCAAT TCAAGATGAC ATCAACGGCG TTGATGCATT ACGTCAAGGC GTAGTGCCAT TGATGTTTAA GATGGTTGAT GCACTAGAGC AATTTGTTGC TCTTGATCTT CCATTCAACA CTGAGGTTCG CGTCGAGCGT GTTGAGAACC TTAAGAACCT TCTAAACAGT GCAGAGGTTA CTCTTGCTGA AAAGTATCGT CTAATCCTAG ATGCTTACTC AATAGAACGT GAGTACGGCT TCTCTTCTAA TGTTAAGCAA GGTCAGCTTC AGCTTGATGG TAAAGAAGTG TTAGTTGACT TCTTTAATCT TGGTCGCGTT GCTTTATATG CGATGAGCTT GGATCAAAAG TCGGCTTGGA TGTATAACGA TGAGACTAAA GGCTGGGATC AACTAGAAGC TAGCTCTCTT CGTGAGCTGA CTAAAGGTAT TCGCATGGCC CGTAAACAGG GTGCACCGGA TCTATTCTCG TTACCAATTC CTGCTGCGGA GGCTGCACAA TAA
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Protein sequence | MSKVSNKTKI ATALIGALAL AGSNLVIADP LSDAQKADAK IHAEAATSQK KVDKYFDQAQ DMLFEYGSVA DERESLKSYN DYVAGLVADQ EATMKSIQDD INGVDALRQG VVPLMFKMVD ALEQFVALDL PFNTEVRVER VENLKNLLNS AEVTLAEKYR LILDAYSIER EYGFSSNVKQ GQLQLDGKEV LVDFFNLGRV ALYAMSLDQK SAWMYNDETK GWDQLEASSL RELTKGIRMA RKQGAPDLFS LPIPAAEAAQ
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