Gene Spea_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2652 
Symbol 
ID5663045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3228160 
End bp3228942 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content44% 
IMG OID641237290 
Producthypothetical protein 
Protein accessionYP_001502507 
Protein GI157962473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00434013 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGG TAAGCAATAA AACAAAAATC GCTACAGCGC TCATTGGCGC ACTAGCCTTA 
GCAGGCAGCA ACTTAGTGAT TGCCGATCCT CTTTCTGACG CTCAGAAAGC TGACGCTAAA
ATTCACGCTG AAGCTGCAAC GTCTCAGAAG AAAGTTGATA AGTATTTTGA CCAAGCTCAG
GATATGTTGT TCGAGTATGG GTCAGTTGCT GATGAACGTG AATCACTAAA ATCTTATAAC
GACTACGTAG CAGGTCTGGT TGCAGATCAA GAAGCTACCA TGAAATCAAT TCAAGATGAC
ATCAACGGCG TTGATGCATT ACGTCAAGGC GTAGTGCCAT TGATGTTTAA GATGGTTGAT
GCACTAGAGC AATTTGTTGC TCTTGATCTT CCATTCAACA CTGAGGTTCG CGTCGAGCGT
GTTGAGAACC TTAAGAACCT TCTAAACAGT GCAGAGGTTA CTCTTGCTGA AAAGTATCGT
CTAATCCTAG ATGCTTACTC AATAGAACGT GAGTACGGCT TCTCTTCTAA TGTTAAGCAA
GGTCAGCTTC AGCTTGATGG TAAAGAAGTG TTAGTTGACT TCTTTAATCT TGGTCGCGTT
GCTTTATATG CGATGAGCTT GGATCAAAAG TCGGCTTGGA TGTATAACGA TGAGACTAAA
GGCTGGGATC AACTAGAAGC TAGCTCTCTT CGTGAGCTGA CTAAAGGTAT TCGCATGGCC
CGTAAACAGG GTGCACCGGA TCTATTCTCG TTACCAATTC CTGCTGCGGA GGCTGCACAA
TAA
 
Protein sequence
MSKVSNKTKI ATALIGALAL AGSNLVIADP LSDAQKADAK IHAEAATSQK KVDKYFDQAQ 
DMLFEYGSVA DERESLKSYN DYVAGLVADQ EATMKSIQDD INGVDALRQG VVPLMFKMVD
ALEQFVALDL PFNTEVRVER VENLKNLLNS AEVTLAEKYR LILDAYSIER EYGFSSNVKQ
GQLQLDGKEV LVDFFNLGRV ALYAMSLDQK SAWMYNDETK GWDQLEASSL RELTKGIRMA
RKQGAPDLFS LPIPAAEAAQ