Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2649 |
Symbol | |
ID | 5663042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3225863 |
End bp | 3226267 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237287 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_001502504 |
Protein GI | 157962470 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00438318 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTA GAAAGCATTC AAGCGTAGAC GAAGAAGCTG AGATTGATAT GACCCCGATG CTCGACATCG TGTTCATCAT GCTTATCTTC TTTATTGTAA CAACATCGTT TGTAAAGCCA TCAGGTCTTG ACTATAACAA GCCTGAAGCG TCACAAGCGA CGAAGAAGCC TTCAGCGAAC ATCTTTATTG GTGTGAGCAA GACGGGTGTC ATCATGATGG AAAACCGTCA AGTTGATATC GAGCGTGTAA CTGCAAACGT AGAGCGTATG CTTGCAGAAG CACCTGAGGC GGCAGTATTA ATTCAAGCAG ACCAAGAAGC TAGACACGGT TTAGTGGTTA AGGTACTTGA TAACGTTAAA GCTGCGGGTA TCGATAAGAT ATCTGTATCG GCGGGGAACG AATAA
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Protein sequence | MARRKHSSVD EEAEIDMTPM LDIVFIMLIF FIVTTSFVKP SGLDYNKPEA SQATKKPSAN IFIGVSKTGV IMMENRQVDI ERVTANVERM LAEAPEAAVL IQADQEARHG LVVKVLDNVK AAGIDKISVS AGNE
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