Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2638 |
Symbol | |
ID | 5663031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3215899 |
End bp | 3216678 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237276 |
Product | hypothetical protein |
Protein accession | YP_001502493 |
Protein GI | 157962459 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.293414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTAG ATCTGACTTT TGAACTTATC GCTCTGCTGT TTTTTGTTGC TATGTTGGCA GGTTTTATCG ACGCGATTGC AGGTGGAGGC GGATTACTGA CGATACCAGC GCTGATGTGG GCAGGGCTGC CACCAACGGT GGCATTGGCG ACCAATAAGC TACAAGCCTG TGGTGGTAGC TTTTTTGCGA GCTTTTATTT TGTGCGTAAA GGCATGGTGA AGCTCAGCGA TATGAAGCTC AGTATTGCTT GTGCCTTTGT TGGTGCTGCA TTGGGCACCA TAGCAGTGCA GATGATAGAT CCCGCTTTCT TAGAAGTGTT CTTACCTTTC TTGATGCTCG CCATCGGTGG CTATTTTCTA TTTTCAAAAA AAATCAGTGA AGAAGATAAA CTGCAAGTAC TCACTCCCGG CGTGTTTGCC TTTACTGCAG CATTAGCCGT GGGCTTTTAT GATGGCTTCT TTGGGCCGGG CACAGGTAGT TTCTTTGCAT TGGCCTTTGT GTCACTGGCC GGTTATGGCC TTGCTAAAGC CACTGCGCAT GCCAAAATCT TAAACTTTTC AACCAATATC GCTTCGCTTA TTTTCTTTGC CATTGGCGGT AAAGTCTTTT GGATGCTAGG TGGGGTGATG TTGATAGGGC AGGCGATTGG CGCTACGCTA GGCTCGAGAT TAGTGTTAAC CAAGGGCACT AAAATTATCA GACCGTTAGT GGTTGTGATG TCTATTGCCA TGAGCGTTAA GCTATTATCA AGCCAGTACG ACCTGTTTGC TTGGTTTTAA
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Protein sequence | MTLDLTFELI ALLFFVAMLA GFIDAIAGGG GLLTIPALMW AGLPPTVALA TNKLQACGGS FFASFYFVRK GMVKLSDMKL SIACAFVGAA LGTIAVQMID PAFLEVFLPF LMLAIGGYFL FSKKISEEDK LQVLTPGVFA FTAALAVGFY DGFFGPGTGS FFALAFVSLA GYGLAKATAH AKILNFSTNI ASLIFFAIGG KVFWMLGGVM LIGQAIGATL GSRLVLTKGT KIIRPLVVVM SIAMSVKLLS SQYDLFAWF
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