| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2568 |
|---|
| Symbol | |
|---|
| ID | 5662961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3126733 |
|---|
| End bp | 3127206 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641237206 |
|---|
| Product | Pol-Pal system-associated acyl-CoA thioesterase |
|---|
| Protein accession | YP_001502423 |
|---|
| Protein GI | 157962389 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000331427 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTC ACAATTGCAT ACTGGCTAGG TATAGTAGGC CTCTATTTTA TCTCATCGAT
TGGCGATTAT CGTTTATGTT TCGTTGGCCT ATTTCGGTTT ACTATGAAGA TACGGATGCT
GGTGGTGTCG TTTACCACTC AAATTACCTT AAGTTTTTTG AGCGGGCTCG GACCGAGTGG
CTTCGCGCTA TGCAGGTCAG TCAAACAGCC TTATTAGCAG AGGACACTGC GTTTGTAGTT
AAAAGTGCAG AATTAGATTT TTGTAAGGCT GCACGCTTTG AGCAGAACCT TATTGTAGAA
ACGAAGGTCA TACAACTTAA GAAAGCATCA ATGGTGTTTG AACAACGCCT AATTGACGAG
CAAGGTGTGG TGTATTGTGA GGCTAACATT GTTGTTGCCT GTGTTGCACT GTCACGTATG
AGACCCAAAG CCATTCCCCA ACATATTGCG CAGGAGTTCA AAGGTGGAAG CTGA
|
|---|
| Protein sequence | MSIHNCILAR YSRPLFYLID WRLSFMFRWP ISVYYEDTDA GGVVYHSNYL KFFERARTEW
LRAMQVSQTA LLAEDTAFVV KSAELDFCKA ARFEQNLIVE TKVIQLKKAS MVFEQRLIDE
QGVVYCEANI VVACVALSRM RPKAIPQHIA QEFKGGS
|
|---|
| |