Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2563 |
Symbol | |
ID | 5662956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3122785 |
End bp | 3123324 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641237201 |
Product | peptidoglycan-associated lipoprotein |
Protein accession | YP_001502418 |
Protein GI | 157962384 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000637753 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGA ATAAGCTATT TAAAGCCATG TTAGTCGTAC TTCCTATTAT GGCTATCAGC GCCTGTAGCT CAACTTCTGA GTCTGAAACG GATGCAACGA GCTCTACTGA GTCGTCTTCA TCGAGTGAAT ATGCTAACAA TGGCGTTGAA ACAGGAGGTG TTGCACCTGT ATTGACTCCA CAGGAGCAGC AACGCCTTAA GTATCAAGAG TTGAGAAAAG AACACATCAT CTATTTTGAT TTTGATCGTA GCTCGGTTTC TCAACAGTTC GCTGAGATTT TGGATGCTCA TGGTGACTAT CTTGTTGAGC ACCCAAATGT TCGAGTGATG ATTGAAGGTC ATGCTGATGA GCGTGGTACA CCAGAATATA ATATTGCACT AGGTGAGCGC CGCGCGAAAG CCGTTGCAAA ATACCTACAA GGCATGGGTG TTCAACCAAG CCAAATGAGC ATCGTGAGTT ATGGTGAAGA GAAACCACTG GATTTTTCTC GCTCAGATGA TGGTTTTGCT AAAAACCGTC GTGCAGTACT CGTTTATTAA
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Protein sequence | MDLNKLFKAM LVVLPIMAIS ACSSTSESET DATSSTESSS SSEYANNGVE TGGVAPVLTP QEQQRLKYQE LRKEHIIYFD FDRSSVSQQF AEILDAHGDY LVEHPNVRVM IEGHADERGT PEYNIALGER RAKAVAKYLQ GMGVQPSQMS IVSYGEEKPL DFSRSDDGFA KNRRAVLVY
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