| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2503 |
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| Symbol | |
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| ID | 5662896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3048089 |
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| End bp | 3049048 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237129 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001502358 |
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| Protein GI | 157962324 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.721496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTC CATCTCAAAA AGCACAAGTT CAATTGGTCA CCATTGATGA AGACCACGTT
GGACAACGAA TCGATAATTT TCTTCTGACA AAACTCAAGG GCGTACCTAA AAGTATGATC
TATCGGATCG TGCGTAAAGG TGAAGTTCGA GTCAATAAAA AGCGCATTAA ACCTGAGTAT
AAGCTAGCCG ATGGGGACAT CGTACGAATT CCGCCTGTTA GAGTGTCTGA AAGCGAAGGG
CGTCCAGGTC CTTCTGCTAA GTTGACGAAA GTGTCTCAGC TTGAAGAGCG GATCCTTTTT
GAAGATAAAT ATCTTATCGT ATTAAATAAG CCATCAGGAA TTGCTGTTCA TGGTGGCAGT
GGTGTTGAAT TTGGCGTGAT TGAGGCTATG CGCTCTTTAC GCACTCAGCA AAAGTTTTTG
GAGTTAGTTC ACAGGCTCGA TAAAGAAACA TCGGGAGTGT TACTTATCGC CAAGAAGCGT
AGTGCACTAA GACATCTACA TGATCAACTT AGATATAAGA AGATGCAAAA GGACTATGTC
GCGCTGGTAA GAGGCGAGTG GCAGAGTCAC GACAAAGTGA TTAAAGCACC GTTGCTTAAG
TTAACACTGA AGTCTGGTGA GCGAATAGTT CGCGTTAATA AAGAGGGTAA AGAGTCTGAA
ACTCGCTTTA AGATCCTACA GCGTTATGAG GATTCAACCT TAGTGCAGGC GAGCCCTGTC
ACAGGCCGTA CTCACCAAAT TCGTGTTCAT TGTCAATTTG CTGGGCACCC AATAGCGTGT
GATGAAAAAT ACAGCGAACA AAAGTTTGAT GACTCTATGC GAGCACAGGG TTTAAATCGC
CTGTTTTTGC ACGCAGCGCA GCTGAAATTC ACCCATCCTG AGACGGAAGA GGTGATGCAA
GTTAAAGCAC CATTAGACAC AATACTCGAA TCAACCTTAA AGAAGTTAAA GAAAGTATGA
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| Protein sequence | MNTPSQKAQV QLVTIDEDHV GQRIDNFLLT KLKGVPKSMI YRIVRKGEVR VNKKRIKPEY
KLADGDIVRI PPVRVSESEG RPGPSAKLTK VSQLEERILF EDKYLIVLNK PSGIAVHGGS
GVEFGVIEAM RSLRTQQKFL ELVHRLDKET SGVLLIAKKR SALRHLHDQL RYKKMQKDYV
ALVRGEWQSH DKVIKAPLLK LTLKSGERIV RVNKEGKESE TRFKILQRYE DSTLVQASPV
TGRTHQIRVH CQFAGHPIAC DEKYSEQKFD DSMRAQGLNR LFLHAAQLKF THPETEEVMQ
VKAPLDTILE STLKKLKKV
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