Gene Spea_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2482 
Symbol 
ID5662875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3028508 
End bp3029158 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID641237108 
Producthypothetical protein 
Protein accessionYP_001502337 
Protein GI157962303 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0256196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGA CTCCACATGA AGCGCGTGTT ATCGGGGTTT TACTCGAAAA AGAGATCACT 
ACCCCAGAGC AATATCCCCT CTCCCTCAAC AGCTTAACCT CAGGCTGCAA TCAAAAAACC 
AGCAGAGAAC CCGTGCTCAA TCTTAGTGAG TCAGAGGTAC AAAATACCTT AGATGCACTG 
ACTAAGAAGC GATTGATCTC AGAGCAATCA GGCTTTGGCA GCCGAGTGGT GAAATACAAG 
CACCGTTTCT GCAATACCGA ATTTAGCGAT TTACAGCTGA AATCTTCCGA ACTGGCCGTT 
ATCTGTCTTC TACTCCTTCG CGGACCGCAA ACACCTGGAG AACTCAGGAC TCGCAGTAAC 
CGCCTACATG ATTTTCATGA TGTAAGCGAA GTCGAGGCTA CTTTAAACGA GCTACACAGA 
CGAGAAGCGC CTCTTGTTAT GCTTTTAGCT AAAGAACCGG GTAAACGTGA AGCACGCTAT 
CGCCAACTAT TTAGCGAAGT CGATGCAAAT CTAGTGCAAG CATTATCATC TAGCTTAGGA 
GCTGAAACCG CAAGCCCACA AGAAAAGAGT GCCTTAGAAG CGAGAGTCTG CACGCTTGAG 
CAAGAAGTCA CTGAGCTTAA AGCTCAATTG CAAAGCTTAC TTAATAATTA A
 
Protein sequence
MELTPHEARV IGVLLEKEIT TPEQYPLSLN SLTSGCNQKT SREPVLNLSE SEVQNTLDAL 
TKKRLISEQS GFGSRVVKYK HRFCNTEFSD LQLKSSELAV ICLLLLRGPQ TPGELRTRSN 
RLHDFHDVSE VEATLNELHR REAPLVMLLA KEPGKREARY RQLFSEVDAN LVQALSSSLG 
AETASPQEKS ALEARVCTLE QEVTELKAQL QSLLNN