Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2455 |
Symbol | |
ID | 5662848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2996985 |
End bp | 2998910 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237081 |
Product | helicase c2 |
Protein accession | YP_001502310 |
Protein GI | 157962276 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGTTA GATTAACACA ACAAGTCGCT GCTGCATTTT CAAGCCAAGG TGTATTAGCA CAATCGATTA AAGGTTTCAG TCGTCGAGAT GTGCAAGCCG AGATGGCGCA CGCTGTAGCG GAGTCCATTC ATAGTCGTAA AAAGTTGGTG GTTGAGGCTG GCACAGGTGT AGGTAAAACC TTTGCTTATC TTATTCCCGC GCTATTAAGT GGCAAGAAAA TCATTATTAG CACCGGAAGT AAAAACCTGC AAGAGCAGCT ATTTTACAAA GACTTACCAG CCTTGTCGGC CATGCTGAAC CTAACGCCTA AAGTCGCTTT GCTAAAAGGG CGCAATAACT ATTTGTGCCA GCATTTGATG GAGAAAGAGT TATCGGGTGC GAGTTCGATG GAGACTCAGG TATTAGACGA CCTGCTCAGA ATTAATCAGT GGGGAGGCCA AACGACTGAC GGCGATATTG GTGGGTTGAC GGCAGTAACA GAAAACTCTC CCGCGTTGCC GTTAATCGTC AGTAGTAAAG AGAACTGCAT TGGTCAGCGC TGCGACTATT TTGATGAGTG CTTTACGCGT AAAGCCCGTA ATCGAGCCAT GAATGCTAAG GTTACCGTCG TCAATCATCA TCTCTTTCTC GCCGATAGGA TCATAAAAGA AACCGGTTTT GCCGAGCTAT TACCCGATTC TGATGTGGTG ATTTTTGACG AGGCGCATCT GCTTCCCGAT ATCGCCGTAA CTTACTTTGG TCAGCAGTGT TCAACACGGC AACTCTCTGA GCTATTCGAT AAGTTAATCG ATATTTATCG TCAAGAGCTT AGAGATGCCA AGCAGATAGA AGCACTCAGT TCTCGTTGCG GCGCTATTTT AAACGAGTGG CATCAAATGT TGTTTGAACT GGGTGATAGC GATTGGCGCC GCCTATTAGG CAACAAAGAG CTGTCTGTGT TGTCGTGGGC TTTAATTAAA GAGATAAAAG TTCTGCAGAG TCTGTTGTTA GGCCATGTTG GACGCAGTGA TAACTTAGAC GACACAATTG TAAAACTGGA GCTTATTACA AATAAGTTAG AGCTATTTTT CTTATGTGAG AACAATCAGG CCGCTTACAG TATCGATTAC GGCCATCGCT ATTTAGTGTT GCGTATTGCA CCTATTGATG TGGCTAAAGA GTGTCGCAAA CTGTTTGAAT CTGATGTTTC GTGGATCTTC ACTTCGGCAA CCTTGCAAAT TAACCGTGAT TTGAGCTTGT TTACCAGACA ACTGGGCTTA ACTCAGTGCC AAGAGATGTT ATTAGAGAGT CCTTTTGATT ACGCTAATAA TGCGCTCTTT TGCGTGCCTC GGCATTTAGC CAGTGTGAGC AACCACCATG CTGCACTGTC ACAATTTGTC GATGTCTGTG TTAAGGCGGT CAATGCCGCA AAAGGTCGGA CTTTCATCCT ATTTACAAGT CACAGAATGC TAAACCTTGT TGCGCCCGCG CTGCAAAGAA GGGTTTCTTA TCCACTTTTG GTGCAGGGGC AGGCAGGTAA GCAGAGCTTA TTGAAGAAGT ATCGTCAGCT TGGTAATGCG GTATTGCTCG GTACTGGCGC CTTTTGGGAA GGGGTCGATG TACGTGGTCG TCTACTGAGT TGTGTGATTA TCGATAAGCT GCCCTTTATC TCACCCGACG ATAATTTGTT TCGAGCGCGA AGCGAAAGTA TCGAGCGAGA GGGTAAAGAT CCCTTCAGTG AAATATCCTT GCCACAAGCG GTGATCACGT TAAATCAGGG CGTTGGCCGT TTGATCCGAG ATGAGAAAGA CAAAGGCGTG CTTATTTTAT GTGACAACAG AATCGTTAAT AAGCCTTACG GACAGGCTTT TTTAAACTCT TTACCTCCGA TGTCGAGAAC TCGAGACTTA GATAAGGCGA CAGCGTTTTT AGAGCGTATT AAGTGA
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Protein sequence | MSVRLTQQVA AAFSSQGVLA QSIKGFSRRD VQAEMAHAVA ESIHSRKKLV VEAGTGVGKT FAYLIPALLS GKKIIISTGS KNLQEQLFYK DLPALSAMLN LTPKVALLKG RNNYLCQHLM EKELSGASSM ETQVLDDLLR INQWGGQTTD GDIGGLTAVT ENSPALPLIV SSKENCIGQR CDYFDECFTR KARNRAMNAK VTVVNHHLFL ADRIIKETGF AELLPDSDVV IFDEAHLLPD IAVTYFGQQC STRQLSELFD KLIDIYRQEL RDAKQIEALS SRCGAILNEW HQMLFELGDS DWRRLLGNKE LSVLSWALIK EIKVLQSLLL GHVGRSDNLD DTIVKLELIT NKLELFFLCE NNQAAYSIDY GHRYLVLRIA PIDVAKECRK LFESDVSWIF TSATLQINRD LSLFTRQLGL TQCQEMLLES PFDYANNALF CVPRHLASVS NHHAALSQFV DVCVKAVNAA KGRTFILFTS HRMLNLVAPA LQRRVSYPLL VQGQAGKQSL LKKYRQLGNA VLLGTGAFWE GVDVRGRLLS CVIIDKLPFI SPDDNLFRAR SESIEREGKD PFSEISLPQA VITLNQGVGR LIRDEKDKGV LILCDNRIVN KPYGQAFLNS LPPMSRTRDL DKATAFLERI K
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