| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2448 |
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| Symbol | |
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| ID | 5662841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2990779 |
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| End bp | 2992446 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237074 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001502303 |
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| Protein GI | 157962269 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000160034 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACCAAC TTTGGATTAA TAATTTACCA GATGATGTGC CTTCTGAAAT TGATGTTGAA
CAATATGCAT CGCTTGTCGA TCTGTTCGAA ACATCGGTTA ATAAATATGC GGATCAACCT
GCGTTTGTGA ATATGGGCGC AACTTTAACT TACCGCAAAC TTGAAGAGCG TAGCCGAGCT
TTTGCGGCTT ATCTGCAAAA TGATTTGAAG TTGAATAAAG GTGATCGGGT CGCCATTATG
ATGCCGAATT TGCTGCAATA TCCTATTGCT CTGTTTGGTA TTTTACGAGC GGGTATGGTG
GTTGTTAACG TCAATCCATT GTACACCCCA CGTGAACTTA AGCATCAGTT GACAGACTCA
GGCGCGAAAG CGATTGTTGT CGTTTCCAAT TTTGCTCACA CCTTAGAGAA AGTGGTTGAC
GAAACACCAG TCGAAAGCGT CATCTTAACT GGGCTTGGTG ATCTATTAAG TGCTCCAAAG
CGCACCTTGG TTAACTTCGT CGTTAAGTAC ATCAAAAAGA TGGTGCCTAA GTACCATTTG
CCACAGGCAA TCTCTATGCG TAAGGCGCTA TATAAAGGTC GCCGTTTGCA GTATGTGAAG
CCAAGCGTAA AAAAAGACGA CTTGGCCTTC TTACAATACA CTGGTGGAAC GACGGGGGTG
TCGAAAGGTG CCATGCTTAG CCACGGCAAC GTTGTGAGCA ACCTTTTACA AGCGGACGCA
GCCTATGGTC CTTTGCTTGA TAACGGAAAA GAGTTCGTAG TAACAGCATT GCCGCTATAC
CATATTTTTG CCTTAACGGT TAACTGTTTG CTATTTATCC ATAAAGGCGC AAACAACTTG
TTGATCACCA ACCCAAGAGA TCTGCCAGCC TTCATCGGTG AACTCGATAA GCATCCATTT
ACCGTGTTAA CAGGCGTGAA TACTCTGTTT AATGCCTTGG TGAACAATGA AGATTTCGCT
AAGCTAAACT TCACAGAGCT TAAGCTATCA ATTGGTGGCG GTATGGCGGT ACAGCGCGCT
GTTGCCGATA AATGGCAGGG GTTAACTAAA ACCCGCTTGC TTGAAGGCTA TGGCCTGACA
GAAGCCGCGC CACTGGTTAC CTGTTGTCCA TATAACCTTG ATGGTTACAA TGGTTCAATC
GGTTTCCCTG TTGCGAACAC TGATATTCAA GTGCGTGACG ATGAAGGTAA TGTTTTGCCA
CAAGGTGAAA TTGGTGAGCT GTTTGCCAAA GGTCCACAGG TGATGGTGGG ATATTGGCAA
CGTCCTGAAG AAACCAGTAA CGTCGTCGAC AAACAAGGTT ACCTGGCAAC GGGTGATATC
GGTTATATGG ATGAAAAAGG CTACTTCTTC ATTGTTGATC GTAAGAAAGA CATGATCTTA
GTCTCTGGAT TCAATGTATT TCCGAATGAA GTTGAAGAAG TGGTTGCACT GCATCCAAAG
GTGATCGAAG TCGCAGCTGT AGGCGTACCT CATGAAGTTT CAGGGGAGTT GGTTAAGGTG
TTTGTGGTCG CAAACGACAA ATCTTTAACC AAAGAGGATG TAATCAAGCA TTGTCGCGTG
CATTTGACGG GCTATAAGAT CCCTAAGCTG GTAGAATTTA GAGATGAACT GCCTAAAACC
AACGTAGGTA AGATCCTACG TAGGGAATTG AGAGATGAGG TCAAGTAA
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| Protein sequence | MDQLWINNLP DDVPSEIDVE QYASLVDLFE TSVNKYADQP AFVNMGATLT YRKLEERSRA
FAAYLQNDLK LNKGDRVAIM MPNLLQYPIA LFGILRAGMV VVNVNPLYTP RELKHQLTDS
GAKAIVVVSN FAHTLEKVVD ETPVESVILT GLGDLLSAPK RTLVNFVVKY IKKMVPKYHL
PQAISMRKAL YKGRRLQYVK PSVKKDDLAF LQYTGGTTGV SKGAMLSHGN VVSNLLQADA
AYGPLLDNGK EFVVTALPLY HIFALTVNCL LFIHKGANNL LITNPRDLPA FIGELDKHPF
TVLTGVNTLF NALVNNEDFA KLNFTELKLS IGGGMAVQRA VADKWQGLTK TRLLEGYGLT
EAAPLVTCCP YNLDGYNGSI GFPVANTDIQ VRDDEGNVLP QGEIGELFAK GPQVMVGYWQ
RPEETSNVVD KQGYLATGDI GYMDEKGYFF IVDRKKDMIL VSGFNVFPNE VEEVVALHPK
VIEVAAVGVP HEVSGELVKV FVVANDKSLT KEDVIKHCRV HLTGYKIPKL VEFRDELPKT
NVGKILRREL RDEVK
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