Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2447 |
Symbol | |
ID | 5662840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2989575 |
End bp | 2990684 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641237073 |
Product | ribonuclease D |
Protein accession | YP_001502302 |
Protein GI | 157962268 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000149434 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTAGCGT TTCAATATAT TGAAGATGAT GCCAGTTTAG CGGCCCTTGT AGAGCAATAC CAAGATGCTG ATTTATTGGT GCTAGACACA GAATTTGTTC GTACTCGTAC CTATTATGCA AGATTGGGCC TTATTCAAGC CTATGATGGT AAGACTCTTG CGTTAATCGA TCCATTAGCT GTGAGTAACC TTGAATTATT TTGGCAACTG CTAAGCAAAG AAAGCAGCGT TAAGTTACTG CATTCATGTA GTGAAGACTT AGAAGTGTTT GCACGCTATG GCAATTGCCA ACCTACTAAT CTATTCGATA GTCAAATTGC TGCAGGTCTA GCTGGTATGG GGCATGGTCT AGGTTATGCC AAGCTTGTAG AGCAAACTCT TGAAGTAAGC TTAGATAAAG GTGAGTCTCG CACCGACTGG CTAAAACGAC CTTTGACAGA GGCGCAGCTC AACTACGCTG CCAATGATGT CTATTACCTT TATAAGCTCT ACCCACAATT GGTTAAGTTA TTAGAAGAGC AGGGCAGACT AGATTGGGTC TATGAAGAAG GCGTTCGTAT GACTCAAGGA CGTTTAGATA CTCCGGAACC TGAGACTGCC TATTTAAAGG TTAAAAATGC CTTTCAGCTA TCCTCAAATC AGCTGGCTGT ATTGAGGGAT TTATCTCAGT GGCGCCTAAA GCGAGCGTTA CAGAAAGATC TGGCTTTGGG CTTTGTGGTG AAAGATCATG CTCTGATTGC CTTAGCTAAG AAGCAGCCTA AGTCAACCAA TGATCTCTTT AAAATGACGG AACTCACGGA GCAGGAAAAG CGTATTCATG GTAAAGAGAT CATTAAGATC ATTACCAATG TTAGTTACGA TAACCCGCCT AAGCCATTAG ATGTTATCGC TCTTAAAACC GGTTATAAAA ACGCATTTAA GAGTATTAAA AACAGCATTA CAGAACAAGC AGAATCTAAG AGTATCCCGT TAGAGTTATT AGGCTCTAAA AAGTATATAC ATGAATACTT ACAGTGGGTT TGGGATGCTA AGAAAGGGAA TAAACCACTT ATTCTTACGG GTTGGCGAGA AGCGATAGTT GCCGAGTCTT TATCAGCACT GAAGTTATAA
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Protein sequence | MLAFQYIEDD ASLAALVEQY QDADLLVLDT EFVRTRTYYA RLGLIQAYDG KTLALIDPLA VSNLELFWQL LSKESSVKLL HSCSEDLEVF ARYGNCQPTN LFDSQIAAGL AGMGHGLGYA KLVEQTLEVS LDKGESRTDW LKRPLTEAQL NYAANDVYYL YKLYPQLVKL LEEQGRLDWV YEEGVRMTQG RLDTPEPETA YLKVKNAFQL SSNQLAVLRD LSQWRLKRAL QKDLALGFVV KDHALIALAK KQPKSTNDLF KMTELTEQEK RIHGKEIIKI ITNVSYDNPP KPLDVIALKT GYKNAFKSIK NSITEQAESK SIPLELLGSK KYIHEYLQWV WDAKKGNKPL ILTGWREAIV AESLSALKL
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