| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2438 |
|---|
| Symbol | |
|---|
| ID | 5662831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 2982409 |
|---|
| End bp | 2983128 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641237064 |
|---|
| Product | fatty acid metabolism regulator |
|---|
| Protein accession | YP_001502293 |
|---|
| Protein GI | 157962259 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000509997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCA ATGCCAAAGG TCCTGCAAGC TTTGCAGAGA AGTATATTGT GCGATCCATA
TGGGAAGATA AGTTTCCGCC AGGCTCTATT CTGCCCGCAG AACGCGAGCT TTCAGAACTG
ATTGGTGTAA CTCGTACAAC ATTACGAGAA GTGCTACAAC GTTTGGCTCG TGATGGATGG
TTGACGATTC AACATGGTAA GCCAACAAGA GTGAATAACT TTTGGGAAAC GTCTGGTTTG
AATATTTTGG AAACTATCGC CGAATTGAAT CCCGATGGTT TTCCTGAACT CGTTGACCAA
TTGCTATCTG CGAGAAGTAG CGTCAGTGCG ATCTATTTTA GAGGTGCTAT CCGTAACAAT
CCTGAAGAAG CGATAGAAGC CTTATCTCAT CTTTCTGAGC TTGAAGATAC GGCTCAAGCA
TATGCTGAGT TTGACTATCA GCTACAGCAC ACTTTAGCAT TTTCATCAGG AAATCCACTT
TACGTGTTAA TCTTGAATGG CTTTAAAGGT TTATATAGTC GAGTCGGGCG TTACTATTTC
TCAAGCGCTG AAGCCCGCGC ATTAGCAATG GATTTTTATA AGCAGTTGCA GCAACTTGCG
ATTGACAAAA ACTATACCGA CGTGCCGGCA TTAATGCGTA CTTATGGCAT TAATAGTGGT
GTGATGTGGC AGAGTCTTCG AGATGATATG CCTGTCGACT TAGGTTATTC AGATAACTAA
|
|---|
| Protein sequence | MIINAKGPAS FAEKYIVRSI WEDKFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW
LTIQHGKPTR VNNFWETSGL NILETIAELN PDGFPELVDQ LLSARSSVSA IYFRGAIRNN
PEEAIEALSH LSELEDTAQA YAEFDYQLQH TLAFSSGNPL YVLILNGFKG LYSRVGRYYF
SSAEARALAM DFYKQLQQLA IDKNYTDVPA LMRTYGINSG VMWQSLRDDM PVDLGYSDN
|
|---|
| |