| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2425 |
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| Symbol | |
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| ID | 5662818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2963294 |
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| End bp | 2963893 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237051 |
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| Product | NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome |
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| Protein accession | YP_001502280 |
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| Protein GI | 157962246 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCTA AATTACGATC TTTCCTTAAA AAGGTATGGA CAGTGCTGAG AAAGCCAAGT
GTTCATTACA GCTTAGGCTT TTTAACGCTC GGTGGCTTCG TAGCTGGGGT GATTTTCTGG
GGTGGCTTTA ACACTGCGTT GACAGTATCT AACACTGAAG CGTTTTGTAT TAGCTGTCAT
GAGATGGAAA ATAACGTTTA CGAAGAACTT AAAACAACGA TTCACTTCAC TAACCGCAGT
GGTGTGCGAG CGACATGTCC CGATTGTCAC GTACCTCATA ACTGGACCGA TAAGATTGCT
CGTAAGATGC AAGCATCGAA AGAAGTGTGG GGTAAGGTGT TCGGTACCAT CAATACTCGC
GAAAAGTTCG AAGAGAAGCG TCGTGAGCTT GCTGAACATG AGTGGGCGCG TTTAAAAGCC
AATGATTCGC TGGAGTGCCG TAACTGTCAC AACTTCGATT ACATGGACTT TACTCGCCAA
TCACCACGTG CAGCTAAGAT GCACTCAACC TCTCTTGCCA GTGGTGAGAA GACCTGTATC
GACTGCCACA AGGGTATTGC CCATCACCTT CCTGATATGA AAGGTGTTGA AGGTTGGTGA
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| Protein sequence | MIAKLRSFLK KVWTVLRKPS VHYSLGFLTL GGFVAGVIFW GGFNTALTVS NTEAFCISCH
EMENNVYEEL KTTIHFTNRS GVRATCPDCH VPHNWTDKIA RKMQASKEVW GKVFGTINTR
EKFEEKRREL AEHEWARLKA NDSLECRNCH NFDYMDFTRQ SPRAAKMHST SLASGEKTCI
DCHKGIAHHL PDMKGVEGW
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