Gene Spea_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2414 
Symbol 
ID5662807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2943067 
End bp2944590 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content43% 
IMG OID641237040 
Producthypothetical protein 
Protein accessionYP_001502269 
Protein GI157962235 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTAG AGTTAGCCTT CTCCACCCCA CAAATTGTCG TTATTGCCGC TATAGCCTTT 
CTATCAATGC TAATTGGCGC TCTATTTAAT CAAAAAAAGA CCCGTAGTCG ATGGGAGCAA
GCACGAAGCC AGCTAACCGA GGAGATGGAA CAAACAAAGC TAGAACTTAA TGAAGATATT
CTTGAACTTA AAGAAACAAT TCATCAAAAA GAATTAGTGA TAGATCAATA TCAAGACAAA
CTAGAGTTTC GTTTAGAGCA ATTAGGCAAA GCCCAAGCCC AAGCCGAGCG CACCCTTGAG
CTTGAACAGT CACTGGCGGA TAACCAACGC AAACAGATGG AAACGCAACT GGCATTGTCA
AAGTCTAACG CCATGCAACA AACGCTTACT GCCAGTTTCG AAGCCAAGCA ACAAGCGCTC
AATGACAAGA TCCAGCTACT GGAAGATTCT GAGGTTCGCC TTAATGCCCA GTTTGAAAAT
TTAGCCACTA AAATTTTCGA ATCAAGAAGT GAAAAACTGC AAACCCAGAA TAATCAACAA
TTAGATAGTG TACTGGCCCC TTTCAAACAG CAACTTGAGG GTTTTAGAGC ACAGGTTCAA
GCTTCATACT CACATGAGCA GACACAGCGA AGTGCACTTA AACACCAACT CGACTCATTA
ACTGAACTTA ATTTAAAGAT GAGCCAAGAT GCTGTTAACC TGACTAAGGC GCTCAAGGGT
GACAACAAGC AGCAAGGTAA CTGGGGTGAA GTCATTCTTG AACGAGTCTT GCAAGAAAGC
GGCCTAAGAG AAGGTCACGA ATACGATACT CAGACCGATC TCAAAAATGA AATAGGTAAG
CGCTTTAAAC CCGATGTAAT TGTTCACCTA CCAGAAAATA AAGATGTGGT TATCGACGCC
AAGATGTCAC TCGTGGCTTA CGAGAGATAC TTCAACAGCG ACGATGAAGC CGTACGAGCC
CAGGCGATTA AAGAACATAT TATCTCGGTA CGCGGTCATA TTAAGGGCTT AAGCCAAAAA
GATTACCAAA AGCTGCATGG TTTAAAGAGC TTAGATTACG TATTGATGTT TATCCCACTT
GAGCCTGCGT TTCTTTTGGC ACTCGAGCAT GATCCTAGCC TGGTCAACTA TGCTCTCGAG
AGCAATATTA TGCTCGTCAG CCCAACCAAT TTATTGGTGG CTCTACGAAC CATTAACAAT
ATCTGGCGCT ACGAATACCA AAATCAAAAT GCGCAGTTAA TTGCCAAGCA GGCCGGAAGG
ATCTACGACA AGTTATGCGG ATATCTTGAC GACATGGAAA AACTTGGTCG TGCAATTGAG
TCGGCGGATA AAAACTTCAG CAACGCCATG AGTAAGTTAT CGACGGGTAA AGGGAACGTC
ATCCGTCAAG CGCACCAGAT GCAGCAACTT GGAGTAGAAA CCAGTAAAAA AGTGGATGCC
CAACTTCTAG ATAAAGCGCT AAGCTTATCT GGTGATGATT TTCATCATGA TGAATTGACT
TTAGATACCG AAAAAATTTC TTAA
 
Protein sequence
MPLELAFSTP QIVVIAAIAF LSMLIGALFN QKKTRSRWEQ ARSQLTEEME QTKLELNEDI 
LELKETIHQK ELVIDQYQDK LEFRLEQLGK AQAQAERTLE LEQSLADNQR KQMETQLALS
KSNAMQQTLT ASFEAKQQAL NDKIQLLEDS EVRLNAQFEN LATKIFESRS EKLQTQNNQQ
LDSVLAPFKQ QLEGFRAQVQ ASYSHEQTQR SALKHQLDSL TELNLKMSQD AVNLTKALKG
DNKQQGNWGE VILERVLQES GLREGHEYDT QTDLKNEIGK RFKPDVIVHL PENKDVVIDA
KMSLVAYERY FNSDDEAVRA QAIKEHIISV RGHIKGLSQK DYQKLHGLKS LDYVLMFIPL
EPAFLLALEH DPSLVNYALE SNIMLVSPTN LLVALRTINN IWRYEYQNQN AQLIAKQAGR
IYDKLCGYLD DMEKLGRAIE SADKNFSNAM SKLSTGKGNV IRQAHQMQQL GVETSKKVDA
QLLDKALSLS GDDFHHDELT LDTEKIS