Gene Spea_2410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2410 
Symbol 
ID5662803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2939618 
End bp2940115 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content42% 
IMG OID641237036 
Productregulator of ribonuclease activity A 
Protein accessionYP_001502265 
Protein GI157962231 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.300312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGATC TGTTACCCGA TTTATTCGAC ACTTATGGCG ACAAACTCAT ATTACTCCCC 
CCTATGTTCA TTTCTTATGG TAAACAGGAG TGCTTTTGGG GTGAAGTCGT CACTGTAAAA 
TGCTATCGAG ACAATTCAAA AGTCAAAGAG TTACTCGCGC AAGACGGTCG AGGTAAAGTC 
TTAGTTGTTG ACGGCCAAGG AGGGATGGAT TGCGCGCTAT TAGGCGATAT GATAGCCCAA 
AATGCTGCGG ATAACGGCTG GCAAGGAGTG GTCATTTTAG GCTGTGTGCG AGATGTCGGT 
ACATTGAAAA CGATTAACCT CGGAATTCAA GCTATTGGTG CTAACCCAAT CAAAACAGTG 
AAAAAGGGTA TTGGTGAAGT TAACATTGCT GTAGAAATAT ACGGCGTTAT TATTTCACCT 
CAATCATTTA TCTATGCCGA CGGTAACGGA GTGGCTATAT CGAATGAAGC GCTAGATATT 
TCGGTACTCA ATTTATAA
 
Protein sequence
MLDLLPDLFD TYGDKLILLP PMFISYGKQE CFWGEVVTVK CYRDNSKVKE LLAQDGRGKV 
LVVDGQGGMD CALLGDMIAQ NAADNGWQGV VILGCVRDVG TLKTINLGIQ AIGANPIKTV 
KKGIGEVNIA VEIYGVIISP QSFIYADGNG VAISNEALDI SVLNL