Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2407 |
Symbol | |
ID | 5662800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2935508 |
End bp | 2937067 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237033 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001502262 |
Protein GI | 157962228 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000206679 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTAC CATTTTTATT TGTCGCAGGG GGTATTGCTC TGTTGACAGG TTGTCAAACT TTAGACAACC AACAGACTTC GGAAGGGATC CCTGCCAAGC CAGTTGCAGT TGAGAAAGTC GCCCCTAAGC CTATTGAGCC AGAGATTGTT GAGGTCGTTG AAGTCACCGA TATTTGGCAA CGAATTCGTC TCAATATGCA GATGGAAGTC CCCGATGAAA AACTCGTTCG CCAATATCGC GACTGGTATA TAAAACATCC TCAACATTTA GAGCGCGTAT CTGAGCGAGC GACGCCATTT ATGTATCTGA TTGTAGATGA GATCGAGAAG CGTAATCTAC CAATCGAGTT GGCTCTGCTA CCCATTGTTG AGAGTGCTTT CGATCCTTTT GCCTACTCAC ATGGTGCAGC ATCAGGCCTT TGGCAATTCA CTTCGCCAAT GGCACGTCAC TTCGGCCTAC AGATGAACTG GTGGTATGAC GGTCGCAGAG ATGTCCCCGC CGCCACGATT GCCGCTTTAG ATATGCTTGA GTACCTTCAT GGTAAAACGG GGCAAAATTG GTTATATGCC ATTGCCGCCT ACAATACAGG TGAAGGACGC GTGATTAACG CGGCTAAGCG CAACAAGAAA AAAGGATTAT CGACTGATTT CTTTAGTTTA AATCTTCCAA GAGAAACTGA GCGCTATGTT CCTCAGTTAC TTGCGTTAGC CGACGTGATC AAAAATGCCG ATAAATATGG CATTAAACTG ACCCCCATCA GCAATGAGCC ACAAATTGAA GTCATCAATA TTGGTAGTCA AATCGATTTA GCGCTTGCCG CTGACATTGC CAATATGACC ACATCAGAGC TACACAAGTT AAACCCAGGT TTTAACCGTT GGGCCACGGC TCCTGATGGG CCACACAAAC TTGTATTGCC CGTTGATAAA GCCGATGCCT TTAAACTGGC ATTAAATGAC ACTAGCACAA CCGATCGCCT CAACTGGGAA CGCTATAAGA TTGAGTCAGG CGACAGCTTA GGATTAATCG CAAAACGTTA CCGCACTACG ATTTCGGCAT TGAAGGCAGT CAATGATATC AATGGCAACA CCATTGTTGC CGGAAAGTAC CTGTTGATCC CCGTTGCAGC GAAGAACCTT GATGAATACC TGTTGTCAGC CGATCAACGT CTAGCGCGTC AACAAAATAA AGCCCGTGGT GCCAGTAAAA TTACCTATAA GGTCAGATCC GGTGATTCTC TGTGGAAAAT TGCCAAGCAG CACAAGGTGA AAACGGCCCA ACTTGCCAGC TGGAATAGCA TGGCACCTAA AGATCCGCTG CAGATTGGCC AGAAGCTCGT CATCTGGTCT GGTACCGTAT CTAACAAGAG TGGCTTAAGC GAAGTGATGC GTACCGTAAA TTATAAGGTC CGTAATGGTG ACTCTTTGGC TCGCATCGCC AATAAGTTCA ATGTCAGCGT TAGCGACCTC GTTCGTTGGA ACTCACTCGA AAAGAGCAAG TATATTCAAC CCGGTCAAAT GCTTAAGCTG TATGTTGATA TGACAAAAGT CAGAACATAA
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Protein sequence | MRVPFLFVAG GIALLTGCQT LDNQQTSEGI PAKPVAVEKV APKPIEPEIV EVVEVTDIWQ RIRLNMQMEV PDEKLVRQYR DWYIKHPQHL ERVSERATPF MYLIVDEIEK RNLPIELALL PIVESAFDPF AYSHGAASGL WQFTSPMARH FGLQMNWWYD GRRDVPAATI AALDMLEYLH GKTGQNWLYA IAAYNTGEGR VINAAKRNKK KGLSTDFFSL NLPRETERYV PQLLALADVI KNADKYGIKL TPISNEPQIE VINIGSQIDL ALAADIANMT TSELHKLNPG FNRWATAPDG PHKLVLPVDK ADAFKLALND TSTTDRLNWE RYKIESGDSL GLIAKRYRTT ISALKAVNDI NGNTIVAGKY LLIPVAAKNL DEYLLSADQR LARQQNKARG ASKITYKVRS GDSLWKIAKQ HKVKTAQLAS WNSMAPKDPL QIGQKLVIWS GTVSNKSGLS EVMRTVNYKV RNGDSLARIA NKFNVSVSDL VRWNSLEKSK YIQPGQMLKL YVDMTKVRT
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