| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2397 |
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| Symbol | |
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| ID | 5662790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2921392 |
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| End bp | 2922684 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237019 |
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| Product | putative serine transporter |
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| Protein accession | YP_001502252 |
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| Protein GI | 157962218 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTCTG TAATTAACAA AACTGAAAAT ACCTCGGCAC AACTCAAGGT AAAATCAAGC
TGGAACAAGA GCGATACTCT ATGGGTATTG GGGCTTTATG GTACGGCAGT GGGGGCTGGC
ACCCTTTTCC TGCCAATTAA TGCGGCGCAA GGTGGCTTGG TCCCGCTCAT TCTTATGGCT
CTACTGGCAC TGCCAATGAC CTTCTTCGCT CATCGCGGCT TAACACGTTT TGTGTTATCG
GGATCAAACC CAGAAGCAGG GATCACCGAA GTGGTAGAGG AGCATTTTGG TGTAGGCATG
GGTAAGGTCA TCACCTTACT CTATTTCTTT GCTATTTACC CGATTTTACT CGTCTACAGT
GTTGCACTTA CCAATACTGT TGAAAGCTTT ATGCAACATC AGCTGGGCAT GACTCCGCCT
AACCGTGCAA CATTGGCCTT AATCTTGATT ATTGGCTTGA TTGCCGTAGT TCGTTTAGGT
GAACAGTTAA TTATCAAAGC GATGAGTATA CTGGTTTTCC CGTTCGTTGC CGTGCTTCTG
CTGCTCTCTG TTTACCTGAT CCCTTACTGG AACACGTCAA TATTTAGCAA TGTGATGCCT
GCAGAAGGTG GAATAAGTAC CATTTTAATG GCTTTGTGGT TGATACTGCC TGTGATGGTA
TTTTCATTTA ACCACTCTCC GGTTATCTCC TCCTTTGCGG TCGATCGTAG AAAATTTCAC
GGTGATGATG CTGAAAAACA GTGTTCACGG ATCTTAGCTT TTAGCCATAT TCTTATGGTT
GTAACAGTGA TGTTTTTCGT GTTTAGTTGT GTGTTTAGCC TATCGCCTGC CAATCTAGCT
GAGGCTAAAG CGCAAAATGT TTCGATATTA ACTTATCTAG CGAACCATTT TGATACGCCG
ATTATCGCTT ATGTTGCGCC AATTGTTGCG ATCATCGCTA TCACTAAGTC ATTCTTTGGC
CACTATATCG GGGCGAGTGA AGGCTTTAAT GGTTTAATCA TCAAGGCTGC ACGCGGTAAG
GGCAAAGAGG TCAACCCTGT TACTCTGAAT CGTGTTACTG CAGGTTTTAT GCTACTGACC
ACTTGGGCTG TAGCAACTAT CAACCCCAAT ATTTTGGGAA TGATTGAAAG CTTAGGTGGA
CCAATCATCG CTCTGCTGTT GTTTATCATG CCTATGTACG CCATCATGAA AGTACCAGCG
ATGAAGCAAT ACTCAGGTAC CATCAGTAAT GTTTTTGTAG TGATTATCGG ATTAGTTTCA
ATCTCGGCAA TCTTCTATTC ATTGGTACAG TAA
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| Protein sequence | MDSVINKTEN TSAQLKVKSS WNKSDTLWVL GLYGTAVGAG TLFLPINAAQ GGLVPLILMA
LLALPMTFFA HRGLTRFVLS GSNPEAGITE VVEEHFGVGM GKVITLLYFF AIYPILLVYS
VALTNTVESF MQHQLGMTPP NRATLALILI IGLIAVVRLG EQLIIKAMSI LVFPFVAVLL
LLSVYLIPYW NTSIFSNVMP AEGGISTILM ALWLILPVMV FSFNHSPVIS SFAVDRRKFH
GDDAEKQCSR ILAFSHILMV VTVMFFVFSC VFSLSPANLA EAKAQNVSIL TYLANHFDTP
IIAYVAPIVA IIAITKSFFG HYIGASEGFN GLIIKAARGK GKEVNPVTLN RVTAGFMLLT
TWAVATINPN ILGMIESLGG PIIALLLFIM PMYAIMKVPA MKQYSGTISN VFVVIIGLVS
ISAIFYSLVQ
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