| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2378 |
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| Symbol | thiH |
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| ID | 5662771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2900354 |
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| End bp | 2901460 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237000 |
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| Product | thiamine biosynthesis protein ThiH |
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| Protein accession | YP_001502233 |
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| Protein GI | 157962199 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTTTG TTGATGTGTT TAAAAAGCTG TCTCGTTCAG AGCTTAAACT CAGATTGTAT
TCAAGCACAG CTGCGGATGT TGAGTGCGCA ATGCAGAAAC CATCGGGAGA CGTAGATAGT
TTACTTGCGC TGTTGTCACC GGCGGCTGAG CCATTTCTTG AGCAGATGGC TCAGCAAGCT
GTCGCGTTAA CTCGTCAGCG ATTTGGCGCG AGTATCGGCA TGTATATTCC GCTCTATCTT
TCAAATCTCT GTGCCAATGA GTGTGATTAT TGTGGCTTCA CCATGAGTAA CAAAATCAAG
CGTAAGACTT TAACTGACAG TGAAATCAAA GACGAGATGC GATCGATTAA GAGCATGGGC
TACGATTCAA TTTTACTGGT ATCGGGTGAG CATGAGTCGA AAGTGGGCGT GCCATACTTC
AAGCAGGTGT TACCACTGAT CACAGAGCAG TTTAGCCATG TGGCCATGGA GGTGCAGCCG
TTGGAAGAGC AAGACTATAG AGAGCTAGTC GCAGAAGGGC TCGATGCGGT GATGCTATAC
CAAGAAACCT ATAATCCTGT GACGTATAGC GAGCACCATA CCCGAGGTAA GAAGAAGGAT
TTTGGTTATC GGCTCGAGTC TCCCGATAGG GTAGCGAGAG CTGGTGTCGA TAAAATAGGT
CTTGGGGTAT TACTCGGCTT AGATGATTGG CGACTCGACG CACTATTAAT GGGGCATCAT
TTAGATTACA TGGAGAAAAC TTATTGGCGC AGTCGTTATA GCATTTCGCT TCCAAGGTTG
AGGCCTTGTA CTGGTGGGGT AACGCCAAAG GTTGAGCTGA CTGATAAAGG CTTAGTGCAG
ATGATCTGTG CCTTTAGATT GTTTAATCAA CAACTAGAGA TTAGTCTATC GACACGCGAA
ACGCCTAAGC TACGGGATAA CCTATTTACA CTAGGGGTAA CTAATGTTAG TGCAGGAAGC
TCGACGCAAC CCGGCGGCTA TGTTGAACCT AACACCGAGC TGGATCAGTT TGAGATCAGC
GATGAGCGCT CACCGCAAGT GGTTGCTAAC GCAATGCTTG AGCGTGGATT AAACCCAGTA
TGGAAAGACT GGGAAAGCGG CTGGTGA
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| Protein sequence | MSFVDVFKKL SRSELKLRLY SSTAADVECA MQKPSGDVDS LLALLSPAAE PFLEQMAQQA
VALTRQRFGA SIGMYIPLYL SNLCANECDY CGFTMSNKIK RKTLTDSEIK DEMRSIKSMG
YDSILLVSGE HESKVGVPYF KQVLPLITEQ FSHVAMEVQP LEEQDYRELV AEGLDAVMLY
QETYNPVTYS EHHTRGKKKD FGYRLESPDR VARAGVDKIG LGVLLGLDDW RLDALLMGHH
LDYMEKTYWR SRYSISLPRL RPCTGGVTPK VELTDKGLVQ MICAFRLFNQ QLEISLSTRE
TPKLRDNLFT LGVTNVSAGS STQPGGYVEP NTELDQFEIS DERSPQVVAN AMLERGLNPV
WKDWESGW
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