| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2367 |
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| Symbol | |
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| ID | 5662760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2885554 |
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| End bp | 2888325 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236989 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001502222 |
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| Protein GI | 157962188 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.457753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTCA CATTTCCGAC TCTGTCAGAC GTGGCTGTAG ATAAGTCTCC GCTCATCATA
TCGATGAGTA ATGATACTTA TCCTTTCCAG TTTGTGGATG AAAACAATCA ACCCAGTGGG
TTCTTGGTTG ATATTTGGTT GGAATGGTCG AAACAGACTC AAACCCAAGT GATTTTTAAA
CCTGCGGATT GGATTACTTC TTTAAGTGAC TTAGCGCTAG GAAGGGCTGA TGTTCACATC
GGCATGGCGA AAACAAGCGC AAGAGACCTG CAGTATGATT TTTCATCAAA AATAGCCAGT
GTAAACAGTT ACCTTTATCT AAATTATCAG CTACCTATCC CATTAAGTTT TTCTGACATC
ATTCCATACA GAGTTGGGGT TGTAAAAGGC GCAGCCCAGA TCGAAATTTT GAAGTCTCTG
GAGCCAAAAC TTACATTTGC CTATTTTGAT AATCGTACTG AACTGCTGAA GTCGGTAATT
GATGAGGAGA TTCTTGTATT TGTGGGCTTA GAAGGCTTTC TAAGAGAAAG CCAAATTAAC
AACACTATAT CCGTTAAATA TCCGCTCGAG AACCGTAAGC TCATCTCTTC GTTTTCCCTC
TATCCAGCAT TAAAGGAAGA AAATAAAGCA TTAGCATCAA AAATCACATC AGGATTTGAG
GCAATCAGTC CAGAGGTTAT CGAAGAACTT AGGCACAAAT GGCTGGGCAA CCTTAGATAC
CAAAATGATA TCGTGATTGC GATGCAAATG GGGGTTGAAC CATTTGCTGA TATCGGCACT
GACGGCTTCC CCCATGGTTT GTTAATCGAT ATTTGGAAGT TATGGTCTGA GAAAACAGGG
CTACCTATCC GTTTTGTGGC TGGCAGCATG AAACAGAGCA TCGATAATGT TAAGCGGGGG
ATTGCCGACG TGCACTTAGG CTATCCAGAA AGTGCGTCTA TGCAAACAGG GCTTAATCGT
GCACATACCA TCTATCGGGT GACGAGTCGT TTATTCTCGT TTGAGAAACC ACTGCAAAAT
GTAGACGAGC TCAAAGGCAA AGTTGTTGCG GTTTCACCAA CGTCACCCTA TCTATCTGAG
CTAATTGACA CACTTCCCGA GTCTGAAATT CGTTATTATC ACTCTGTTGA TAGCATGATT
GAGGCATCAC AGAGAGGGGA GATTAGCGCG TTTGTTGCTG CAGCAGCCTG GACTCAGCAT
TATTTGCTGT TAAATCATAA CTGGGATCAA TTTTATCAGT ATATGGCTCT GGAATTTAAG
ACCGACTTGT ACGTGCTAAA TCGGGGTAGT CAGCAAGGGT TTGCAGACAG AATTTCTGCA
GGTTTTACGC TGATCTCTCA GAGTGAATTG GCACAAATTG AGCGAAAGTG GATGTTGAAC
CCTGAAGATA GAATTTTTAA AAGTCAGCAG AGTTTGATTA ACTTAACGCC TGTTCAGCAG
CGAATAATTG ATGAGATTGG TACCGTGAAA GTCGGTTACC TTCGCAACTG GCGCCCGATG
GAGTATCAAA AGGCTGGTCA ATACGCGGGG GTTAATAGTG AGATAGTTAA TATCATAGCA
AATGAACTGG GGCTAGATAT TGAAACGCAA GTGTACGATG AATGGGGTAG CCTACTCGAT
GCTTTAATCC GTGGTGAGGT GGATATGGCT GGCAGTGTGG CTAAAACGCC TGAGCGTGAA
TTCCAATTGA GTTTCACCGA TTCCTATTGG CCCTCTCCTT GGGGGGTTGT AACATCATTA
AATAGCGTGA GTACTTACAG TTTAGATGAG CTTAGTGGTC AACGAATTGC CGTCATAGAA
GGCTATCATA TTGTGGGTGA GTTGATGCGA AAGTATCCAA ACCTGAAATT GATATTAGTA
CCTGATAGTG ATGCTGGTCT ACGAGCAGTG AGTCAAGCTC AAGCAGATGT CTTTATCGAT
AAGGTTGTCA ACCTAAACAG CGGTATTCGA CGCGGGCAGT ACGCTAATTT GAAAATGTCT
ATGTTAGTCG ACTTCGCCGA GCAGCGCAGT CATTTTGGTA TACACCATAC TAAGGAAGCC
CTGTTACCAT TAATCAACGC TGTTTTGGCC AATATTGATT CTACACGACA GCAGCAGATC
CATCAGAAGT GGGCGTCGCA GACAGTCGAG TTTGGTCGTG AGGAATATGA AAACAAGGTG
AAGATCGGTA TTCTAGTGCT TTCGATGTTA ACTATAGTCG TCTTTATAGC ACTATTAGCC
AATAAGCGTT TACGTAAAGA GGTCGCTTTA CGTATTGAAG CCGAAAATAA AATGGCACAC
TTTGCTAAAC ACGATAGCTT AACTCAATTA CCGAACCGTG CGCTAATCGA AGACCGCCTC
GAACAGGCTA TCTTGCAGCA TGCACGGGAT ACGGCGCAGT TTGCAGTGGT CTTCATAGAC
CTAGACAAAT TTAAACAGGT TAATGATCGA TATGGGCACC AAGTTGGTGA TAAATTACTT
GTGCATGTAA GCGAAGTACT GACTAATGGT ATCCGTCGCT CTGATACGGT AGGGCGTCTT
GGTGGCGATG AGTTTGTGAT TATTTTAAAT GATATCAAAG ATCTTAAATC GGTTTATGAC
GTAACTGAAA ATTTATTAGC CAGTCTATCT AAGCCTTTTT TGATTAGTGA ACAAACAGTG
TCAGTATCGG CCAGTATCGG TATTGCGGTT TATCCAAAAG ATGGTGAGTG TATCGATGCA
CTATTAAAAA CAGCGGATCA ACAGATGTAT CGTGTAAAAA ATGCGGGTGG TAGGGCATAT
AGAAGTACCT AG
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| Protein sequence | MFVTFPTLSD VAVDKSPLII SMSNDTYPFQ FVDENNQPSG FLVDIWLEWS KQTQTQVIFK
PADWITSLSD LALGRADVHI GMAKTSARDL QYDFSSKIAS VNSYLYLNYQ LPIPLSFSDI
IPYRVGVVKG AAQIEILKSL EPKLTFAYFD NRTELLKSVI DEEILVFVGL EGFLRESQIN
NTISVKYPLE NRKLISSFSL YPALKEENKA LASKITSGFE AISPEVIEEL RHKWLGNLRY
QNDIVIAMQM GVEPFADIGT DGFPHGLLID IWKLWSEKTG LPIRFVAGSM KQSIDNVKRG
IADVHLGYPE SASMQTGLNR AHTIYRVTSR LFSFEKPLQN VDELKGKVVA VSPTSPYLSE
LIDTLPESEI RYYHSVDSMI EASQRGEISA FVAAAAWTQH YLLLNHNWDQ FYQYMALEFK
TDLYVLNRGS QQGFADRISA GFTLISQSEL AQIERKWMLN PEDRIFKSQQ SLINLTPVQQ
RIIDEIGTVK VGYLRNWRPM EYQKAGQYAG VNSEIVNIIA NELGLDIETQ VYDEWGSLLD
ALIRGEVDMA GSVAKTPERE FQLSFTDSYW PSPWGVVTSL NSVSTYSLDE LSGQRIAVIE
GYHIVGELMR KYPNLKLILV PDSDAGLRAV SQAQADVFID KVVNLNSGIR RGQYANLKMS
MLVDFAEQRS HFGIHHTKEA LLPLINAVLA NIDSTRQQQI HQKWASQTVE FGREEYENKV
KIGILVLSML TIVVFIALLA NKRLRKEVAL RIEAENKMAH FAKHDSLTQL PNRALIEDRL
EQAILQHARD TAQFAVVFID LDKFKQVNDR YGHQVGDKLL VHVSEVLTNG IRRSDTVGRL
GGDEFVIILN DIKDLKSVYD VTENLLASLS KPFLISEQTV SVSASIGIAV YPKDGECIDA
LLKTADQQMY RVKNAGGRAY RST
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