| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2319 |
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| Symbol | |
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| ID | 5662712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2823102 |
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| End bp | 2824382 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641236929 |
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| Product | putative AcnD-accessory protein PrpF |
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| Protein accession | YP_001502174 |
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| Protein GI | 157962140 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATG GCTCAAAAAG AATTCAAACG GTAAAACTTA TGACCACATC AACAGACCAG
AAAACAAAAT TCCCGCCGCA AATCAAAGTG CCTGCAACCT ATATGCGTGG CGGCACCAGT
AAAGGGGTGT TCTTTAATTT AACCGACTTG CCAACGGAAG CGCAGGTAGC AGGCGCTGCC
CGTGATGCGC TGCTGCTAAG AGTCATAGGT AGTCCAGATC CTTATGGCAA ACAAACTGAC
GGCATGGGCG GCGCAACATC GAGCACCAGT AAAACAGTGA TCCTTGCCAA GAGTGACAAG
GCCGATCACG ATGTCGATTA CCTGTTTGGC CAAGTCGCTA TCGACAGACC TTTTGTCGAT
TGGAGTGGCA ACTGCGGCAA CTTAACTGCC GCTGTGGGAT CATTTGCAAT CAGTAACGGT
TTAGTCGATA GCAGCCGCAT TCCTGAAAAC GGTATTGCAG TGGTGCGTAT TTGGCAGAAA
AACATCGGTA AAACCATTAT CGCTCATGTA CCCATCACCA ACGGAGAAGT GCAAGAGACG
GGGGAATTCG AGCTTGATGG TGTCACGTTC CCCGCTGCCG AGGTGCAAGT TGAGTTTTTA
GACCCAGCCG ATGGTGATGG CGCCATGTTC CCAACAGGTA ACTTGATTGA TGACCTAATC
GTGCCAACCG ATGTAGTAGC TGGTGGGGTA CTGCAAGCCA CCATGATCAA CGCAGGTATT
CCAACCGTGT TTATCAATGC GGCAGAGTTG GGTTACACAG GCTCAGAGCT GCAAGAAGCT
ATAAACGGCG ATGTTAAAGC GCTTGCCATG TTTGAGACGA TTCGTGCCCA CGGCGCAGTG
CAGATGGGGC TGATTAAGCA TATCGACGAA GCGGCAAACC GTCAGCATAC GCCCAAAGTG
GCCATAGTAG CAGCACCAGT GGACTACACA TCATCCAGTG GCAAAGCTAT AGATAAAAAC
ACTATCGATT TAAATGTACG CGCACTGTCT ATGGGCAAGC TTCACCATGC CATGATGGGC
ACCGCAGCCG TCGCTATCGG CACCGCAGCA GCTATCCCTG GCACGCTAGT CAGCTTGGCA
GCAGGTGAGG GGCAGAGTAA TGCAGTTAAC CCTGGCTTTG TCACCTTTGG TCATCCATCT
GGCACCCTAA AGGTCGGTGC AGAGGCAAGC CAAGTCGATG GTGACTGGCA GGTCAATAAA
GCCGTGATGA GCCGCAGTGC TCGAGTACTG ATGGAAGGTT GGGTGAGAGT ACCTGCGGAT
CCGTTAATGT CGGAAAGTTA A
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| Protein sequence | MTNGSKRIQT VKLMTTSTDQ KTKFPPQIKV PATYMRGGTS KGVFFNLTDL PTEAQVAGAA
RDALLLRVIG SPDPYGKQTD GMGGATSSTS KTVILAKSDK ADHDVDYLFG QVAIDRPFVD
WSGNCGNLTA AVGSFAISNG LVDSSRIPEN GIAVVRIWQK NIGKTIIAHV PITNGEVQET
GEFELDGVTF PAAEVQVEFL DPADGDGAMF PTGNLIDDLI VPTDVVAGGV LQATMINAGI
PTVFINAAEL GYTGSELQEA INGDVKALAM FETIRAHGAV QMGLIKHIDE AANRQHTPKV
AIVAAPVDYT SSSGKAIDKN TIDLNVRALS MGKLHHAMMG TAAVAIGTAA AIPGTLVSLA
AGEGQSNAVN PGFVTFGHPS GTLKVGAEAS QVDGDWQVNK AVMSRSARVL MEGWVRVPAD
PLMSES
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