Gene Spea_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2280 
Symbol 
ID5662673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2762438 
End bp2762935 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content44% 
IMG OID641236890 
Producthypothetical protein 
Protein accessionYP_001502135 
Protein GI157962101 
COG category[S] Function unknown 
COG ID[COG4628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.768136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAC ATCAACAGAA CAACCCGCTT CACGGCTTAA AACTTGAAAC AATGCTAACT 
GAGCTTGTGA AGTTCTATGA CTATAAAGTA CTTTATGCAG CCCTTAAATT GGCATGCTTT 
AATTTAAATC CGAATATGGA ATCGTGCATT AAGTTTTTGA AAAAGACTGA TTGGGCGAGG 
GAACGCGTAG AAGCATTTTA CCTATATCGT TTTAAGCGCA TGCCAAAAGG CAACGAAGCA 
CAAATGGAGC TAAAGCCGCG AGAACGTGGT TATGCCGACG GTATTGTGCC GCGCAAACCT 
GAAAAGTTAA CCGTGGAGCT TGTCGCAGAA ATGCGCGCAA AGGCCATGGA AAACTATAAG 
GAAATGAAGA AAAATGGTCC GCGATCAGGC TTTAGTAAAG GTAAGGCAAG AGCGCAAGAT 
TCTTACAAGC AAAATCGCAG CAGTGGCGCA AAACGACCAG CGGCGTCACA AGATCCAACT 
AACCCTTGGG GTAAGTGA
 
Protein sequence
MIEHQQNNPL HGLKLETMLT ELVKFYDYKV LYAALKLACF NLNPNMESCI KFLKKTDWAR 
ERVEAFYLYR FKRMPKGNEA QMELKPRERG YADGIVPRKP EKLTVELVAE MRAKAMENYK 
EMKKNGPRSG FSKGKARAQD SYKQNRSSGA KRPAASQDPT NPWGK