| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2270 |
|---|
| Symbol | |
|---|
| ID | 5662663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2746961 |
|---|
| End bp | 2747440 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641236874 |
|---|
| Product | PEBP family protein |
|---|
| Protein accession | YP_001502125 |
|---|
| Protein GI | 157962091 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1881] Phospholipid-binding protein |
|---|
| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0505873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTTG CGCTTTGCGA TCTTACCGTC ACCAGCACCG CTTTTAATCA GCTAGGTTCA
ATTCCTAAAG CGCACACGGG AGAGGCAGAA AATACCTCTC CCCAACTCAC CTGGACAAAT
GTTCCTGACG GCTGTAAATC TTTTGCGGTT ATCTGTCACG ATCCCGATGC TCCAAGGGTG
AACGCCGATG GTTCATTCGG CTACGTACAT TGGCTTGTGT ACAATATTCC CTATGGCATT
CACCAACTTG AAGCAAACAA CACACTCTAT ACATCGGGGA TAAATGATTT TGGTCTAGGT
GGCTACGGTG GCCCTATGCC ACCCAAAGGC CATGGCATTC ATCTATATTA CTTCTGGGTT
TTAGCGCTAG ATGAAGAATT GGATCTGCCC GAAGGACTTA ACATGCAGGA GTTGTTAGCT
AAGATAGAAC CTAATTTAAT CGGCATGAAC CGCTTAGTTG GAAGCTATCA GCGGGACTAG
|
|---|
| Protein sequence | MAFALCDLTV TSTAFNQLGS IPKAHTGEAE NTSPQLTWTN VPDGCKSFAV ICHDPDAPRV
NADGSFGYVH WLVYNIPYGI HQLEANNTLY TSGINDFGLG GYGGPMPPKG HGIHLYYFWV
LALDEELDLP EGLNMQELLA KIEPNLIGMN RLVGSYQRD
|
|---|
| |