Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2252 |
Symbol | |
ID | 5662645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2730078 |
End bp | 2732093 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236856 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_001502107 |
Protein GI | 157962073 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0819924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTTC CGCATTTATT AGAACCCTTA GATCTGGGAT TTACCCAGTT AAAAAACCGA GTATTGATGG GCTCAATGCA TACAGGTTTG GAAGAAGAAA AGGGCGGCTT TGAGAAACTG GCAGCGTTTT ATAAAGAGCG CGCATTAGGT GGCGTAGGTC TTATTGTGAC AGGTGGCATA TCGCCAAACC TACGGGGGCG TTTAGCACCT AATGCCTGCC AACTTAGTTT TCCGTGGCAG GTTAAGAAAC ATACCAAAGT GACTCAAGCC GTGCATGAGG CTGGCGGCAA AATTTGTATG CAACTCTTGC ATGCCGGTCG CTACGGCTAC CATCCTTTCT CTAGTGCACC GAGTAAGATT AAATCGCCTA TTACCCCATT TACACCATCG GCTATGTCTG CAAGACAGGT TAACGGGACA ATCAAAGATT ATGCCACCAG CGCAGCTCTA GCAAAAAAGG CGGGTTATGA TGGTGTAGAG GTGATGGGAA GCGAAGGTTA CTTGATAAAC CAGTTTATCA GCTCTCGTAC TAATAAACGT ACCGATAAGT GGGGCGGGGC TTTTGAAAAT CGTGCCCAAT TCCCGATCGA AATTGTTAAA AAAATTCGAG AAAAAGTCGG CTCTGACTTT ATCATTATTT TTAGATTATC TATGTTAGAT CTTGTCGATA ACGGTTCGAC TTGGGAAGAG GTGGTGCAGC TGGCTAAATG GCTAGAACAA GCTGGCGTGA CCATTATCAA CACAGGTATT GGTTGGCATG AGGCTCGTGT ACCGACCATT GCCACGAGCG TACCGCGCGG CGCCTTTGCT TGGGTGACTG AGCGTTTGAT GAAAGAGATG TCAATTCCGC TTATTGCCAC TAACCGAATT AACACACCTG AAATAGCCGA GCACATTATC TCATCGGGTC AGGCCGACAT GGTGTCGATG GCGAGGCCTT TCCTTGCTGA TGCCGAGTTT GTCAATAAAG CAGCTGCCAA TACACCTGAA CTGATTAATA CCTGTATTGG TTGTAACCAA GCCTGCTTGG ACCATAGTTT TGCCCTTAAA CGTGCAACTT GTCTTGTTAA CCCTAGAGCT TGTTATGAAA CCGAGCTTAA CTTCACGCCG GTACAAAAGA AGAAGCGTAT TGCGGTTATG GGCGCTGGTC CAGCCGGTAT GGCATTTTCT ATTTATGCGG CGAGTCGTGG CCATGAAGTG GTGTTATTTG AAGCGAAAGC TGAAGTTGGT GGTCAGTTTA ACCTAGCTCG TAAGATCCCG GGGAAAGAAG AGTTTAACGA AACAATTCGA TACTTCCTTA ATCAGATTAA GCTACATAAG GTGGAACTTC GCTTAAACAC TCGTCTCGAT GCCAGTGTGG TACGTGATGA GAAGTTTGAT GAAATCGTTA TGTCTAGTGG TGTAAAACCA AGACCTATTG AGTTACCTGG TTTCGATAAC CCTAAGGTGG TTGATTACCA GAAGGTGCTC AATGGCGAAG TCGAAATTGG TCAGAAGGTC GCGTTAATCG GTGCGGGAGG CATAGGTTTT GATATGGCTC ACTTCCTGTG TGAGTCTGAG TCTTCAACAC TGGATCTTAA TCGCTGGTTA AAGCAGTGGG GGATAGATAA AGACTATAAA GAGCCTGGTG GACTCACAGT CCCAGTTACT GAAGATAAAC ACAGACAAGT GTATCTGCTA CAGCGTAAAT CGACCAAGAT GGGCAAGGGG CTTGGCAAAA CCACCGGTTG GATCCATCGA TCGGTGCTGA AGCAGCATCA TGTAATAATG AAAACAGGCG TTAGCTACGA GAAATTCGAC CAGCTAGGCC TACACATTAG CATCGATGGT AAAAGCGAGG TATTGGATGT CGATAATGTC ATCTTATGTG CTGGGCAAGT ATCAAATACC GAACTTGTTG ATGAGATGAA GTCTACAGGC ATTCCAGTTC ACCTTATTGG CGGTGTCGAT GTGGCTGCCG AACTCGATGC CAAGCGCGCT ATTCGTCAAG GTGCGGAGCT TGCTATCGCG CTGTAA
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Protein sequence | MSFPHLLEPL DLGFTQLKNR VLMGSMHTGL EEEKGGFEKL AAFYKERALG GVGLIVTGGI SPNLRGRLAP NACQLSFPWQ VKKHTKVTQA VHEAGGKICM QLLHAGRYGY HPFSSAPSKI KSPITPFTPS AMSARQVNGT IKDYATSAAL AKKAGYDGVE VMGSEGYLIN QFISSRTNKR TDKWGGAFEN RAQFPIEIVK KIREKVGSDF IIIFRLSMLD LVDNGSTWEE VVQLAKWLEQ AGVTIINTGI GWHEARVPTI ATSVPRGAFA WVTERLMKEM SIPLIATNRI NTPEIAEHII SSGQADMVSM ARPFLADAEF VNKAAANTPE LINTCIGCNQ ACLDHSFALK RATCLVNPRA CYETELNFTP VQKKKRIAVM GAGPAGMAFS IYAASRGHEV VLFEAKAEVG GQFNLARKIP GKEEFNETIR YFLNQIKLHK VELRLNTRLD ASVVRDEKFD EIVMSSGVKP RPIELPGFDN PKVVDYQKVL NGEVEIGQKV ALIGAGGIGF DMAHFLCESE SSTLDLNRWL KQWGIDKDYK EPGGLTVPVT EDKHRQVYLL QRKSTKMGKG LGKTTGWIHR SVLKQHHVIM KTGVSYEKFD QLGLHISIDG KSEVLDVDNV ILCAGQVSNT ELVDEMKSTG IPVHLIGGVD VAAELDAKRA IRQGAELAIA L
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