Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2214 |
Symbol | |
ID | 5662607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2686963 |
End bp | 2688399 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236817 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_001502069 |
Protein GI | 157962035 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000208976 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACC ATTCCCAGCC TCAAGGCGCT GATTACAACT ACACCATCGT CCGTCAATTC GCTCTAACAA CTGTGTTATG GGGAATTGTT GGCATGTCGG TAGGTGTACT AATTGCAGCT CAGTTAATCT GGCCGCAGCT AAACTTCGAA ACTTCATGGT TAACGTATAG TCGTCTACGA CCTCTACATA CGAATGCCGT GATTTTCGCG TTTGGTACCT CAGCCCTTTT CGCCACATCC TATTATATCG TTCAACGCAC CTGTCAAACT CGACTATTTG CACCTAAGTT AGCCGCATTT ACGTTCTGGG GTTGGCAAGC CATCATTCTT TCGGCAGCAA TTAGTTTGCC ACTTGGTATT ACCAGTGGTA AAGAATACGC CGAATTAGAA TGGCCAATTG ATATCGCAAT TACCGTCGTA TGGGTCTCCT ATGCTGTGGT TTTCTTCGGT ACTATCATTA AACGAACCAC GTCGCATATC TATGTGGCTA ACTGGTTCTT TGGTGCCTTT ATTATCACGG TAGCTGTACT TCACATAGTT AACTCTATGG CTGTACCGTT AACTATGACT AAGTCTTACT CGCTATATAG TGGCGCTGTA GATGCTATGG TCCAGTGGTG GTATGGTCAC AATGCGGTAG GCTTCCTGTT AACTGCAGGT TTCTTAGGTA TGATGTACTA CTTCGTACCT AAGCAAGCTG GTCGTCCGGT TTATTCGTAC CGCCTATCTA TCGTTCACTT CTGGGCACTT GTTGCTTTGT ATATCTGGGC TGGTCCTCAC CACCTACACT ACACAGCACT TCCAGACTGG ACTCAGTCAC TTGGTATGGT GATGTCTCTA ATCCTATTCG CTCCTTCTTG GGGTGGTATG ATTAACGGTA TCATGACGCT ATCGGGTGCA TGGCACAAAC TTCGTACAGA CCCTATCTTG CGTTTCCTTG TTGTTTCATT GTCTTTCTAC GGTATGTCTA CCTTCGAAGG CCCAATGATG GCAATTAAGA CGGTTAACGC ACTTTCTCAT TACACTGACT GGACTGTTGG ACACGTTCAC TCTGGTGCAT TGGGTTGGGT TGCCATGGTT TCTATCGGTT CTTTGTATCA CTTGATACCA GTTCTGTTTG GCCACGGCCG TATGTACAGC ACAAACCTAA TTAACGTTCA CTTCTGGTTG GCAACAATCG GTACTGTTCT TTATATCGTT TCAATGTGGA TCTCTGGTGT GATGCAGGGT CTAATGTGGC GCGCAGTTAA CTCTGACGGT ACATTGACTT ATAGCTTTGT TGAAAGCTTA GAAGCCTCTT ACCCGTTCTA CTTTGTTCGT TTCCTAGGTG GTGTATTCTT CCTTACAGGT ATGTTCATAA TGGCATACAA CGTACTGCGT ACTGTTAAGG CCCCTAAAGA TTCTTTGCCA GCAATTGCTG ATGCAAAAGC AGCTTAA
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Protein sequence | MMNHSQPQGA DYNYTIVRQF ALTTVLWGIV GMSVGVLIAA QLIWPQLNFE TSWLTYSRLR PLHTNAVIFA FGTSALFATS YYIVQRTCQT RLFAPKLAAF TFWGWQAIIL SAAISLPLGI TSGKEYAELE WPIDIAITVV WVSYAVVFFG TIIKRTTSHI YVANWFFGAF IITVAVLHIV NSMAVPLTMT KSYSLYSGAV DAMVQWWYGH NAVGFLLTAG FLGMMYYFVP KQAGRPVYSY RLSIVHFWAL VALYIWAGPH HLHYTALPDW TQSLGMVMSL ILFAPSWGGM INGIMTLSGA WHKLRTDPIL RFLVVSLSFY GMSTFEGPMM AIKTVNALSH YTDWTVGHVH SGALGWVAMV SIGSLYHLIP VLFGHGRMYS TNLINVHFWL ATIGTVLYIV SMWISGVMQG LMWRAVNSDG TLTYSFVESL EASYPFYFVR FLGGVFFLTG MFIMAYNVLR TVKAPKDSLP AIADAKAA
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