Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2205 |
Symbol | |
ID | 5662598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2674405 |
End bp | 2675418 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641236808 |
Product | threonine aldolase |
Protein accession | YP_001502060 |
Protein GI | 157962026 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.250112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGAG TAATCGATTT ACGCAGTGAT ACCGTCACGC AGCCTTGCCA GAACATGCGC GCGTTAATGG CATCAGCCGA AACGGGTGAT GATGTTTATG GTGAAGATCC TAGCGTTAAG CAGCTTGAAT CCTATGCAGC TGAATTACTG AATAAACAAG CTGCGGTATT TTGCCCCTCA GGCACGCAAA GCAACTTAAT GGGGCTGCTG TCTCATTGTG GCCGAGGCGA TGAGTACATT GTTGGCAACG TTGCACATAC CTATCTTTAC GAAGGCGGCG GCGCCGCGGT ATTAGGGAGT ATTCAGCCAC AGCCATTAAC GCTACAAGCT GATGCAACCA TGGATCTTTC CGAGCTGGAA AAAGCCATTA AGCCTAAAGA CGTTCACTAT GCCAGAACCA AGTTGATATG CCTGGAAAAC ACTCATGGAG GTCTTCCTTT ACCTGACGGA TACACTCAAA ACGTTAAAGC GATAGCACAG CGCCATGGCT TAAGCATGCA TTTAGATGGT GCTAGATTAT TTAATGCCGT TGTTGCTGGT AATAAGAGTG CTGCGACATT AACTGCAGAT TTTGACAGTG TTTCAATCTG TTTATCAAAA GGCTTAGGAG CGCCTGTTGG CTCGTTACTC GTAGGCTCAA ATAAGTTTAT CGATGAAGCT AGGCACTGGC GAAAAATGTT AGGTGGCGGT ATGCGCCAAG CAGGAATTAT TGCCGCTGCA GGCTTGTATG CCTTACAAAA CAACGTTAGT CGCTTGAGCG ATGATCACCG CCGAGCGAGC GAATTAGCAA ATGCGCTAGG GCAGATTGAC GGTGTTAGTA TCCCGTTAGG TCAGGCCAAC ACCAACATGT TATATGTGAG CGTTAGCCAA GCAATGAGAG AACGCCTTGC TGAGCGTGCA GCCAATTACA ATATATTGCT ACCTGCTGGT GAGCAGATGC GTTTGGTCAC TCACTTAAAT ATTAATGATG ATGACCTAAA AGCCATTATT GAGTTATTTC AACAAGCGGC TTAA
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Protein sequence | MAGVIDLRSD TVTQPCQNMR ALMASAETGD DVYGEDPSVK QLESYAAELL NKQAAVFCPS GTQSNLMGLL SHCGRGDEYI VGNVAHTYLY EGGGAAVLGS IQPQPLTLQA DATMDLSELE KAIKPKDVHY ARTKLICLEN THGGLPLPDG YTQNVKAIAQ RHGLSMHLDG ARLFNAVVAG NKSAATLTAD FDSVSICLSK GLGAPVGSLL VGSNKFIDEA RHWRKMLGGG MRQAGIIAAA GLYALQNNVS RLSDDHRRAS ELANALGQID GVSIPLGQAN TNMLYVSVSQ AMRERLAERA ANYNILLPAG EQMRLVTHLN INDDDLKAII ELFQQAA
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