Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2188 |
Symbol | codB |
ID | 5662581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2652703 |
End bp | 2653968 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236791 |
Product | cytosine permease |
Protein accession | YP_001502043 |
Protein GI | 157962009 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1457] Purine-cytosine permease and related proteins |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGCG ATAATAATTA CAGTTTAAGT CCGGTTCCTC AATCGGGCCG TAAAGGTGTT TTCTCTCTGA CGATGGTGAT GCTGGGATTA ACCTTTTTTT CAGCAAGTAT GTGGACGGGA GGAACGCTCG GCACAGGCCT CTCTTTTAAT GATTTTGTTC TAGCAGTTCT TATTGGTAAT TTAATTCTCG GTATCTATAC TTCATTTCTT GGTTACATCG GCGCTCAAAC AGGCCTCTCT ACTCATCTCC TCGCGCGTTA CTCATTCGGT TTAAAAGGTT CTTGGCTACC CTCGCTACTT CTCGGTGGCA CGCAAGTTGG TTGGTTTGGT GTTGGCGTGG CAATGTTTGC TATTCCGGTA CAGAAAGCCA CAGGTATAGA TACCAACCTG CTGATTATTG TCTCGGGTCT ACTGATGACC TTTACCGTGT ACTTCGGTAT TGGCGCGATT ATGATTTTGT CAGCCATCGC GGTTCCAGCC ATCGCCCTAT TTGGCGGATT CTCGGTACTA CAAGCGGTCG ACACTATGGG CGGCATGCAA GGCTTAATGG CGGTCGAGCC TGAAAATCCA ATCGATTTTA ATACCGCTCT GGTATTGGTT GTCGGCTCAT TTATCTCAGC CGGTACACTG ACCGCAGATT TTGTTCGCTT CGGTAAAAAT CCTAAAACTG CCGTGTTTGT CACCATGTTT GCCTTCTTCG TCGGTAATTC GTTGATGTTT ATCTTCGGCG CAGCGGGCGC TGCGGCAACG GGGCAAGCTG ATATCTCTGA GGTTATGATT GCTCAGGGAC TATTAATCCC AGCCATTATC ATCTTGGGTC TTAATATTTG GACCACCAAT GATAATGCGC TGTATGCTTC GGGCTTAGGC TTTTCAAACA TTACCGGCTT GCCGAGTAAG TACCTGTCAA TTTTTAACGG CGTGATCGGC ACTCTGTGCG CGCTATGGCT ATATAATAAC TTTGTCGGTT GGTTAACCTT CCTATCGGCA GCTATCCCAC CTATTGGTGG CATTATCATC GCCGATTACT TACGTAACCG TGAAAAATAT AAAGACTTCG CCAATGCTAA GTTTTCAACG GTAAATTGGG CTGCGATTAG CGGTGTCGTG ATAGGCGTGC TAGCAGGCCA CCTATTACCA GGCATAGTGC CAATTAATGC CGTACTTGCG GGTGCCATCA GCTATTTATT AATAGATGAA GCGCTAAAAC GCATGAATAA ACAAAAATTA GTTAAATCAG ATTGTAAAAA TGCTACCAAT GCATAA
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Protein sequence | MASDNNYSLS PVPQSGRKGV FSLTMVMLGL TFFSASMWTG GTLGTGLSFN DFVLAVLIGN LILGIYTSFL GYIGAQTGLS THLLARYSFG LKGSWLPSLL LGGTQVGWFG VGVAMFAIPV QKATGIDTNL LIIVSGLLMT FTVYFGIGAI MILSAIAVPA IALFGGFSVL QAVDTMGGMQ GLMAVEPENP IDFNTALVLV VGSFISAGTL TADFVRFGKN PKTAVFVTMF AFFVGNSLMF IFGAAGAAAT GQADISEVMI AQGLLIPAII ILGLNIWTTN DNALYASGLG FSNITGLPSK YLSIFNGVIG TLCALWLYNN FVGWLTFLSA AIPPIGGIII ADYLRNREKY KDFANAKFST VNWAAISGVV IGVLAGHLLP GIVPINAVLA GAISYLLIDE ALKRMNKQKL VKSDCKNATN A
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