| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2173 |
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| Symbol | |
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| ID | 5662566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2630610 |
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| End bp | 2631374 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236776 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001502028 |
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| Protein GI | 157961994 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAC GTTTAATTGG AAAGGTTGCC TTAATTACCG GGGCAGCCCG AGGTGTTGGT
TTAGCAACTG CGAGATTAAT GGCAAGGGAA GGAGCCCAAG TTGTTCTCAC CGATATAAAT
GCTGAACAAG GGAAAGAGAT AGCAAATAGT ATTGGTAATA ATAGCTTGTT CATAGAACAT
GATGTCACTA AAGAGGCTGA TTGGTCTGCT GTTATCAATC ATATTGAAGC TAAATTTGGC
CAATTAAATA TTCTGCTCAA TAACGCCGCA ATCTTGCAAC TTGGTGACAT CAAAGAAGAA
ACGTTGGCAG GATGGCAGAG AGTGCACATG GTTAATTCAG ACAGTGTTTT TCTTAGGATC
CACTATGCTT TGCCGCTAAT GGAAAAAAGT GGCGGTGGTT CAATTATCAA TATGTCCTCT
TCATCAGCCG TTTTCGGTAT GCCACATTTT GCAGCCTATG GTGCGAGTAA AGCCGCTATT
CGTGGACTGT CTCAAAGTGT TGCGGTTTAT TGTTCGCAGA CCAAAAATAA CGTTAGGTGC
AACACCTTGC ATCCGGATTC AATTATGACA CCTATGGTTA TGGAGATAAG TGCACAAGCA
GGTGATCGCA GCTTAGCAGA TCCTGATCGT GCTAAGGCTT ATGTATGCCG TCCTGAAGAC
GTCGCTAATA GTGTTTTATT TCTAGCGTCC GATGAATCAA AACATATTAA TGGTGCCGCT
ATTGCGCTAG ACGGTGGGGC GACAGTAACT CCTCCTTATA TTTAA
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| Protein sequence | MSGRLIGKVA LITGAARGVG LATARLMARE GAQVVLTDIN AEQGKEIANS IGNNSLFIEH
DVTKEADWSA VINHIEAKFG QLNILLNNAA ILQLGDIKEE TLAGWQRVHM VNSDSVFLRI
HYALPLMEKS GGGSIINMSS SSAVFGMPHF AAYGASKAAI RGLSQSVAVY CSQTKNNVRC
NTLHPDSIMT PMVMEISAQA GDRSLADPDR AKAYVCRPED VANSVLFLAS DESKHINGAA
IALDGGATVT PPYI
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