Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2172 |
Symbol | |
ID | 5662565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2628853 |
End bp | 2630499 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236775 |
Product | electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_001502027 |
Protein GI | 157961993 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGAAG TCATGGATTT TGATGTTGTG ATTGTAGGAG CTGGGCCTTC AGGGCTATCC GCCGCTTGCA GGCTCATGCA GCTGAGTAAA CAGGAAAACC AACAAATTTC TGTTTGTGTT GTGGAGAAAG GTTCAGAGGT TGGGGCACAT ATCCTATCTG GCGCCATTAT CGAACCTCGA GCAATCGATG AGTTGTTTCC CGATTGGCGG ACTCTAGGGG CACCATTAAC AACCAGCGTG ACAGAAGATA GATTACTTTT TTTGTCTGAT AATAAAAAAT CAATCACCTT GCCCCAAGTC GCTGTTCCAA AGCCGTTACA TAATCAGGGA AACTATATTG CAAGTTTAGG TAATGTTTGC CGTTGGTTGG CTGAACAAGC TGAAGCGTTA GGAGTCGAGA TATTTCCTGG ATTCGCTGCG GCAGAAGTCC TATACCATGA GGATGGCTCA GTAAAAGGCA TTGCAACCGG AGACATGGGG GTCAGTAAAG ATGGTCAACC GAACTCTCAA TACATGCAAG GCATGGAGCT GCATGCAAAA TTTACCTTAT TCGGTGAAGG GTGCCGTGGT CATTTAGGAA AAGAACTGAT CCACAAGTTT GGCTTAGCCG ATGAAAGTGA TGCACAGCAT TATGGGCTGG GAATGAAAGA GATCTGGGAC ATTAATCCTG AGCTGCATCG TCCTGGACTG GTTGTGCATG GTTTTGGCTG GCCACTTGAT AAAAATGCTG GCGGTGGTTT TTTCCTATAC CACACCGATA ATCATCAGCT AGTTGTAGGC TTAATTGTCG ATCTCAATTA CAGCAATACT CATTTAAGTC CTTTTGATGA ATTTCAGCGC TTAAAGCATC ACCCACAATT GGCACAATAT CTAAAAGGTG GGTCACGGGT GTCGTATGGA GCAAGGGCTA TAGCTAAAGG GGGACTCAAT GCGTTACCTG TAATGAGTTT TGCTGGAGGC ATGCTGCTAG GTTGTAATGC TGGCACATTA AATGTGGCAA AAATTAAAGG TACCCATACC GCAATGAAGT CGGGGATGTT ATGTGCTGAA ACCGTATTTG ACCTGCTCAA TAACGACGTA ACATCAGGCT CCACTGACGC AGTGTTCGAA GCTAAATTTA AACAGTCTTG GCTTTATGAG GAGCTACATA GCAGCCGAAA TTTTGGGCCC GCATTACACA AATACGGTAC GCTCGCTGGC GGTGGCTTTA ACTATATTGA TCAGAATTGG TTTGGCGGAA AGTTACCCTT GTCGCTACGA GATAATATTG AAGACCATGC TTGCCTCCTC CCCAGCAGTG AGTCAAAACC CATTACTTAC CCCAAACCTG ATGGAATCTT AAGTTTTGAT AAGTTGACCT CGGTATTTCT GTCCAATACC AATCACGAAG AAGATCAGCC TTGCCATTTA TCACTACTCG ATCATTCCGT GCCTTCTAAA CACAACATCC CAATTTTTGA TGAACCAGCA GCACGCTATT GTCCTGCTGG GGTATACGAG GTAGTTGACA ACGGCGGAGG CAATGCACTG CAAATCAATG CGCAGAATTG TTTGCATTGT AAAACCTGCG ACATAAAAGA TCCGTCACAA AATATCAGAT GGACAGTGCC AGAAGGCGGT GGCGGGCCGA GCTATCCCAA CATGTAA
|
Protein sequence | MREVMDFDVV IVGAGPSGLS AACRLMQLSK QENQQISVCV VEKGSEVGAH ILSGAIIEPR AIDELFPDWR TLGAPLTTSV TEDRLLFLSD NKKSITLPQV AVPKPLHNQG NYIASLGNVC RWLAEQAEAL GVEIFPGFAA AEVLYHEDGS VKGIATGDMG VSKDGQPNSQ YMQGMELHAK FTLFGEGCRG HLGKELIHKF GLADESDAQH YGLGMKEIWD INPELHRPGL VVHGFGWPLD KNAGGGFFLY HTDNHQLVVG LIVDLNYSNT HLSPFDEFQR LKHHPQLAQY LKGGSRVSYG ARAIAKGGLN ALPVMSFAGG MLLGCNAGTL NVAKIKGTHT AMKSGMLCAE TVFDLLNNDV TSGSTDAVFE AKFKQSWLYE ELHSSRNFGP ALHKYGTLAG GGFNYIDQNW FGGKLPLSLR DNIEDHACLL PSSESKPITY PKPDGILSFD KLTSVFLSNT NHEEDQPCHL SLLDHSVPSK HNIPIFDEPA ARYCPAGVYE VVDNGGGNAL QINAQNCLHC KTCDIKDPSQ NIRWTVPEGG GGPSYPNM
|
| |