| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2148 |
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| Symbol | |
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| ID | 5662541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2601739 |
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| End bp | 2602482 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236751 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001502003 |
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| Protein GI | 157961969 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATA AAGATAAAGT TATTTTTGTT ACCGGTGCGG GTCAAGGAAT GGGACTGGCA
ATGGTTAAGT TATTTGCCGA GCAAGGCGCT AAAGTCGCCG CTATCGATAT TAATGAAGCT
GCAGCTAAAA AAGTGGCTGA GCAACAAAGT GCTGAGTCAG GCACTGAGGT TATTGGTATT
GGTTGCGATA TTTCCCAGTC CAGTTCAGTC CGAGACGCGA TTACGGAGGT GGTGCAACGC
CTCGGCAGTA TTGATGTTGT GATCAATAAC GCGGGGATCG GCTCAATTGA CTCATTTATC
GATACCCCGG ACGAAAACTG GCACAAAGTG ATTAATGTCA ATCTTACCGG CACCTTCTAC
TGTTGCCGCG AAGCTGCCCG TGTCATGAAA GAGCAGGGTA GCGGTTGTAT CATCAATATT
TCGAGCACCG CAGTGATGTC AGGTGATGGC CCTAGTCATT ACTGTGCATC TAAAGCGGGC
GTTATCGGAC TTACCCGCTC AATTGCAAAA GAGCTTGCTG CAAGTGGCAT TCGCGTTAAT
ACCATAGTCC CCGGTCCTAC CAATACCCCA ATGATGGCTG ATATTCCAGA AGAGTGGACT
CAGCAGATGA TCGACGCCAT TCCATTAGGT CGTATGGGAG AACCCGCTGA TATTGCCAAG
CTTGCATCTT TTATTGCCAG TGACGATGCC TCTTTTATAA CCGGGCAGAA CTTAGCGGTA
AACGGCGGAA TGGCGTTTTT ATAA
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| Protein sequence | MKHKDKVIFV TGAGQGMGLA MVKLFAEQGA KVAAIDINEA AAKKVAEQQS AESGTEVIGI
GCDISQSSSV RDAITEVVQR LGSIDVVINN AGIGSIDSFI DTPDENWHKV INVNLTGTFY
CCREAARVMK EQGSGCIINI SSTAVMSGDG PSHYCASKAG VIGLTRSIAK ELAASGIRVN
TIVPGPTNTP MMADIPEEWT QQMIDAIPLG RMGEPADIAK LASFIASDDA SFITGQNLAV
NGGMAFL
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