| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2135 |
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| Symbol | |
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| ID | 5662528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2586740 |
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| End bp | 2587933 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236738 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001501990 |
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| Protein GI | 157961956 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTAATA TTGACCTAGA AATTGAATAC TACAATGACC TTGTTGAATC TATTTATGAC
GCTGCACAAA ATAATTCCAG TTGGTCTGAG CCTTTAGAGG AACTGAGAAA GTTATTTGGC
GCAAATTATG TCACTTTAAT ACTCAAACAA CCCCTGCCTG ATGATGAACA AGGCATAGGC
CTAATGGTCG CGGTTGGCGG TAATATAGAT GATGAGAGTA AAATCCAGTA TTTGCCCTAC
GGCCATACGT TAACGCCCTT TAATGACCAA GAACCGAATA CGATTGTAAC GGTTGATGAT
CTTATGGACG AACAGCAGTG GATTGAGAGT TCCTATCGGC GTCATTGGTG CATGCACAAT
GATGTTTATC ATGTGATGGC GGTTGATATC TCAATTCCTG ATGTCGGTAA TCTGCCTTTT
AGGATCACTC GCGGAGAAGC CGATACCGCA TTTAGTGCAG AAGATAAAGC ATTATGCCAG
TTTTTTGTTT CTCACCTTAG ACGCGCGCTC GGGATCCACT TGCAACTCAA TCGAAGTGAA
TCATTGGGCT CAATGTACTC TCAGGCCATC GGCCGTTTAT CCATTGCCAC CATTAAAATT
GATGAGCAAG GTAAAGTATT AGATCAAAAT ATCTTTGCAC GAGAAATTAT CGATGCAGGA
GATGGCCTAA AAATAGTCTG CGGTAAATTA ACTGCGACAT CGAGCAGCGA TAACCGAGAA
TTAAAACATT TAGTCAAAGG CGCGTTTGAA CGAGCACGTA ATAATCGTAA AAATATTTTG
CCTGAAGCCA TGTCTGTTAG TCGCCCCTCT TGTGAGGTCA ATTTAGGCAT AGTGGTTGAA
GTCATCCCAG GTCTTGATTG GGCTGAGGGT AAAGGTCAAG CTCAAGCAAT TGTCTACATT
CGAGATTCAG TGAGCAAATC TCAAGCCAGT AGCGATATGG CGAAGAAGCT TTTTGGCCTC
ACGCCTGCTG AAACAGCCTT GTCTTTACAG TTAACGAATG GTTTGTCGCT AGAAGAGGCA
TCTGAAGCCC TCAATATTCG TAGAAATACT GCTAGGGCAC ACTTACGCGC GATTTTTTCC
AAAACCGGTG TTCGTCGTCA GACTGAGCTT GTACGAATTT TTCTAAACAG TGTGGCTGCG
CTGGGTTATA ACAATGTCGA TTCAAAAAGT AATGACATTA GAACGGAGGA GTAA
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| Protein sequence | MPNIDLEIEY YNDLVESIYD AAQNNSSWSE PLEELRKLFG ANYVTLILKQ PLPDDEQGIG
LMVAVGGNID DESKIQYLPY GHTLTPFNDQ EPNTIVTVDD LMDEQQWIES SYRRHWCMHN
DVYHVMAVDI SIPDVGNLPF RITRGEADTA FSAEDKALCQ FFVSHLRRAL GIHLQLNRSE
SLGSMYSQAI GRLSIATIKI DEQGKVLDQN IFAREIIDAG DGLKIVCGKL TATSSSDNRE
LKHLVKGAFE RARNNRKNIL PEAMSVSRPS CEVNLGIVVE VIPGLDWAEG KGQAQAIVYI
RDSVSKSQAS SDMAKKLFGL TPAETALSLQ LTNGLSLEEA SEALNIRRNT ARAHLRAIFS
KTGVRRQTEL VRIFLNSVAA LGYNNVDSKS NDIRTEE
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