Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2127 |
Symbol | |
ID | 5662520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2576334 |
End bp | 2578784 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236730 |
Product | hypothetical protein |
Protein accession | YP_001501982 |
Protein GI | 157961948 |
COG category | [R] General function prediction only |
COG ID | [COG1033] Predicted exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00224294 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACTGT CTCAATCTAG CTCAAATAGC TCCACTGAAA TCAGCTTACT CAAACGTTTT GTCGACTTCA GTGCCCGTCA GCTCATCCAG AAACGTAAGC CTCTTGGGCT ACTCTTTTTG TTGATCACCC TTTTGCTTAG CTACTCTGCT TTAGATACTC GCTTTGATCC CGGCTTTACT AAGTTAGTTC CTATTCAACA CCCTTATATG CAGGCTTTTT TAAAGCACTC AAGCACCTTT ACCGGTAGTA ACCGAGTCAT GGTCAGTATG ACGTGGACCG GTGAGGGGGA TATTTATAAT GCAGAATTTC TTAATCGACT CAGAAAAGTC CATGATGAAG TTATTTTTAC ACCAGGCATA AATAGAACAA CGGTAAGATC ATTATTTGCG CCGGAAGTGC GTTACATGGA AGTCACAGAA TTTGGATTCA TGGGTGATGT GGTTATCCCT TCTCGATTTA CAGCCGACGA AGCAGGGCTA AACTGGGTGC GAACCAATGT AACTAAATCT GGACAAGTGG GCAATTTAGT CTCAAATGAT CTTAAGTCCG CCATGGTTCA AGCCGATTTG ATGGAAACCG ATCCTGAAAC AGGAGAAGCC ACAGACTATG CAAAAGTAGC TGCCCACCTT GAACAAATTC GTAGTGAATT AGCAGGACAA GGAATTGACA TCCAAATCAT TGGTTTTGCT AAAGTTATGG GCGATGTCAT GGATGGGTTG TCTACGGTTT TACTGTTTTT TGTTATCGCA TTCATTGTGA CCTTGCTACT GCTCTGGCGT TACACTCTAT CGCTAAAACT CACCTTGTTG GCGATTACCG TTGCATTACT GCCTGTCGTT TGGCTACTTG GGATCCTACC ACTGCTTGGC TACGGCATCG ATCCTATGTC TGTACTCGTC CCTTTCTTAA TTTTTTCTAT CGGTGTGTCC CATGCTGTTC AAATGACCAA CGTTTGGAAG CAAGATGTAC TTGATGGCTA TAGTTCACCT GATGCGGCTG TTAATGCCAT CCGTAAATTA GCCATACCCG GTACGGTCGC TTTACTTGCT AACGCGCTGG GTTTTATGGT GATCATGGTT ATCGATATTC CTATGGTGCA AGAGTTGGGA ATGACGGCTT GTCTAGGCGT TGCACTGATG ATCATCACCA ATAAAATGTT TATGCCAGTG ATACTGTCTT ACCTCACATT AGAAAAAATG GCCTCGCATA AAAAACAGCA ACCACTACAG AAGGAACAGC AACTCTGGTG GAAGGTGTCT GCTTTGGCGA CCCCGAAACC CGCGCTTTTG TCAGTCTGCG TCATGTTGAT TCTGTTAACC CTAGGGACAT GGCAATCCCG CTCGCTGCTA ACTGGAGATA TTGGTAGCGG TGTGCCGGAG CTCAGAGAGG ATTCACAATA TAATCTCGAT AATGCACAGA TTATTAAAGA CTATTCTATC GGAATGGATG TCTTATCAGT GTATCTTGAA AGCTATAAGC GGGATGAATC TTGCCTTGAT TGGGAAGTGA TGAATGCAGT TGACCGGTTT GATTTTCATA TGCGGGGTGT CGATGGTGTC CGCTCGGTAA AGACCACTGC GGGTTTAGCT AAATTATATG TGTCTGGCAA TAACGAAGGT AACCCCTTAT GGAGAACTTT ACAAAGGGAT CCAAGCGCAT TGCTTGCCGG TGCGAGTGCT GCAAATCCGT TACATGCGCT TAATGATAAC GGTTGTAAAA CCATTAACAT GTTGGTTTAT TTAAATGATC ATCAAGATGC AACGCTTAAG CATGTAGTGA AAGAAATTAG GCTTTTTACC GACAGCCAAA ACATCTCTAA TGCTGAGTTT AAGTTATTGG GTGGTAACGC TGGCGTCGCA GCAGCAACCA ATGAAGCGGT AGAAAAAGCT GAAGTACAGA TGCTTATCTC TATCTTCAGC GCAATTAGTT TATTGTGTTG GGTAACCTTT CGTTCTGCCA GAGGTGTGTT ATGTGTGATT CTGCCGTTAA TGTTAGTTTG CATACTTTGT AATGCACTAA TGGCCATACT TGGAATTGGT CTGAAAGTGT CAACCCTGCC TGTGATTGCA CTAGGAATTG GCGTTGGCGT GGATTACGGG ATCTATATAT ACGAGAAGAT GCAACATTCA CTTTATCAAG GCCACGATTT GCGTAACTCC TTTTATAAAG CGATGCGAAG CCGTGGTACC GCTGCAGTGT TTACTGCGGT AACTATGTCT ATTGGTGTCG GGACCTGGGC TTTTTCCGCG CTAAAATTTC AGGCCGACAT GGGCATTTTA TTAGCGTTTA TGTTTCTCGT GAATGTATTA GGGGCGATAT TCTTGTTGCC GGCGCTTGCT TGTCTCCTCG GTGTAAAACC AGCAAAAGAG GCGCAGGGCG CAGTTACAGA TACGCTTAAA AATAACATTG AAAATATAGC CATCGCCACA GACAAACCAT TACAGACATA A
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Protein sequence | MSLSQSSSNS STEISLLKRF VDFSARQLIQ KRKPLGLLFL LITLLLSYSA LDTRFDPGFT KLVPIQHPYM QAFLKHSSTF TGSNRVMVSM TWTGEGDIYN AEFLNRLRKV HDEVIFTPGI NRTTVRSLFA PEVRYMEVTE FGFMGDVVIP SRFTADEAGL NWVRTNVTKS GQVGNLVSND LKSAMVQADL METDPETGEA TDYAKVAAHL EQIRSELAGQ GIDIQIIGFA KVMGDVMDGL STVLLFFVIA FIVTLLLLWR YTLSLKLTLL AITVALLPVV WLLGILPLLG YGIDPMSVLV PFLIFSIGVS HAVQMTNVWK QDVLDGYSSP DAAVNAIRKL AIPGTVALLA NALGFMVIMV IDIPMVQELG MTACLGVALM IITNKMFMPV ILSYLTLEKM ASHKKQQPLQ KEQQLWWKVS ALATPKPALL SVCVMLILLT LGTWQSRSLL TGDIGSGVPE LREDSQYNLD NAQIIKDYSI GMDVLSVYLE SYKRDESCLD WEVMNAVDRF DFHMRGVDGV RSVKTTAGLA KLYVSGNNEG NPLWRTLQRD PSALLAGASA ANPLHALNDN GCKTINMLVY LNDHQDATLK HVVKEIRLFT DSQNISNAEF KLLGGNAGVA AATNEAVEKA EVQMLISIFS AISLLCWVTF RSARGVLCVI LPLMLVCILC NALMAILGIG LKVSTLPVIA LGIGVGVDYG IYIYEKMQHS LYQGHDLRNS FYKAMRSRGT AAVFTAVTMS IGVGTWAFSA LKFQADMGIL LAFMFLVNVL GAIFLLPALA CLLGVKPAKE AQGAVTDTLK NNIENIAIAT DKPLQT
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