Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2123 |
Symbol | |
ID | 5662516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2568927 |
End bp | 2570036 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641236726 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001501978 |
Protein GI | 157961944 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.747407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGAAT CGAACAAGCA ATTGCCTAAT GATTATCAAA CGCAAAAATT AAAAGATCGC CAAGCGTTAA ATTACCCATT CGAACCACCA TTGTGTGATG CAAATGTTGT CTATGTGGCA AAAGGCGTGC TTTGGGCGCG ACTCTCTATG CCGATGGGCC TAGATCATAT CAATGTTTAT ATTTTGGAAG ATTTCGATGG CTGGTATCTA ATTGATACCG GTTTAAATAC TGAAGGTAAT AAAGCTCTGT GGCTTTCGCT TGCAGCAAAT TACCTGAGCG CAAAACCGGT TAAAGGCGTT ATCTGTACCC ATTTTCATTA TGACCACTCT GGCCTAACTA GCTGGTTAAC CGAATATTTT AATGTGCCTT TGTATATGAC TCACGGTGAG TACTATATGT TGAGAGGGGT AGCTGCAACT CATAATGCTA CCGGGAGTAA ACAGGATAAG CTGTTTTATA CTCACGCAGG CTTGTCTGCT GAGTATGCCG CAAAGATTTT TGAAGCTTGT AAGAAAGATC CTTATATCAC GCATTACCCG CCACGTTTTT CCCGCCTAAG AGAGGGGGAT ACTTTCAGAA TAGGACATCG AGAGTGGCAG ATTTGGATTG GGGAAGGTCA TAGCCCAGAG CATGCTTGTT TATATAGTGA AGCCATAGAC GAAGAACCTG CACTTTTAAT TGCAGGTGAC CAAGTTCTTC CCGAAATTAG TTCAAATATT TTGGTTAGTA GCATTGAACC TGAAGCGAAC CCGTTAGCTA ACTGGTTTAG ATCGTTAAAG CGACTCAAAG CATTAGATAG TGAAACTATG GTACTGCCAG CACATGGTCC CGTTTTTGTA AACTTGCATA CTAGAGCTGA ACAACTGGAA CAGCATCACA TAAACCAACT GGATACACTG CGTCAGTTAA GCATGAGTCA GGCAAGCTTT AGTGCCTTGG AAGCTGTAGA GGCGTTATTT AAACGCCCTT TACAACCAAT AGAGAAGCTG ATGGCTCTTG GCGAAACACT GGCCCATTTA AATTGGTTAA TAAACGTAGA AGAGTTAACA AAGACCCTTT GTAATAAAAG TAATAAATAT TTATATAACA ATAAGCTAAG AATAGCTTAG
|
Protein sequence | MDESNKQLPN DYQTQKLKDR QALNYPFEPP LCDANVVYVA KGVLWARLSM PMGLDHINVY ILEDFDGWYL IDTGLNTEGN KALWLSLAAN YLSAKPVKGV ICTHFHYDHS GLTSWLTEYF NVPLYMTHGE YYMLRGVAAT HNATGSKQDK LFYTHAGLSA EYAAKIFEAC KKDPYITHYP PRFSRLREGD TFRIGHREWQ IWIGEGHSPE HACLYSEAID EEPALLIAGD QVLPEISSNI LVSSIEPEAN PLANWFRSLK RLKALDSETM VLPAHGPVFV NLHTRAEQLE QHHINQLDTL RQLSMSQASF SALEAVEALF KRPLQPIEKL MALGETLAHL NWLINVEELT KTLCNKSNKY LYNNKLRIA
|
| |