| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2122 |
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| Symbol | |
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| ID | 5662515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2567365 |
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| End bp | 2568750 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236725 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001501977 |
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| Protein GI | 157961943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCTA TTTTACCCTC AGTGACATGG CGTACACATA GCACGCTTGT GTTGTTAGCA
CTGGTTTACG TCTTTTCATT TATTGATAGG AATGTCATTG CCATCGTTCT GGAGCCAATA
AAACAAGAGT TTGGTGCATC AGATACGTTA ATGGGTTTCT TAAGTGGTCT TGCATTTGCC
ATTCTATATG CAGGGTTAAG CTTACCTCTA AGCCGTTTAG CTGACAGAGG CGGAAATAGA
CGTAACATTA TTGCGGTATG CTGCGGGCTA TGGAGCATTG CAACAATGGC CTGTGGTATG
GCGCAGCACT TCTGGCAATT GATGATAGCC AGAATGACGG TTGCAGTGGG TGAGGCTGGC
GGTATAGCGC CGTCAATATC TATGGTGTCA GATCTTTACC CGCCTCACCG TCGTTCATTG
GCCATTAGCG TATTAATGAT TGGCCCTCAT CTTGGGTTAC TAGCAGCAAT GGTTGCTGGC
GGGTGGATTG CGCAGGAATA TGGGTGGCGT TCTGTGTTCT TATTCTTTGG TGCCCCCGGT
ATTTTGCTTG CGCTACTGCT ATTTTGCTTT ACCAAAGATC CTGGGCATGG TGTTTACGAC
AAAAATACCA CGCTCAATAA TGAAAAAAAT AAGCAAGAGT CCTTTTTCAA ACAGTTAAAA
GGAATAATGA AAGTAAAAGG ATTTATTTGG ATCGCTATGG GCTGCGCACT CGCAGGCATG
GCTGGTTATG GTTACGGTAT ATGGGTACCG ACGTTCATGG TACGTAACTA CGATATGTCT
TTAGCTCATG CTGGTATTAG CTTTGGATTA GCCGGCGGTA TTTTTGCTGC TATCGGTACT
ATATTCAGTG GCGTTTTTTG TGACAAGTTG TCAAAGCGCG ACTCTCGTTG GCAAATTGGC
CTGCCCATCA TAGGTATTTT GATCAGCCTG CCTATGGGAG TGGCCTTTAT GTTATGGCCA
GCTGACGCCT TTTGGATGGT GGGAGAGATC AAAATCCCCC ACGCTATTGT TTTTGCAGCC
CTGTTTAGTT TTTTTAATTG CTGGTGGCCG AGTTTATCTT ATGCAGCTAT CAGTCATTTA
ATGACCAGCA GCCAACGTGC AACTGGCGCT GCGTCACTAA ACCTATTCTT AACACTTTTC
GGAGCAGGCC TTGGCCCGTT GCTAACAGGT ACATTAAGTG ACGTGTTTGG AGAAATATTC
GCAGGTGAAG GCCTCAAATA TGCGCTCGTG GCCACTATGA TGCTGCTGCT CGTTTCTGCA
TGGTTTTACT ATAAAGGACT ATCTCCTTAT CAAACTCGAA TGAAACAGTT GAATAACGAT
GAGGTTGAAT CAATAGATAA CTCCGTGCCA CCGACTACCG TTAACGATCC ACTTCCAAGT
ACATAG
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| Protein sequence | MQPILPSVTW RTHSTLVLLA LVYVFSFIDR NVIAIVLEPI KQEFGASDTL MGFLSGLAFA
ILYAGLSLPL SRLADRGGNR RNIIAVCCGL WSIATMACGM AQHFWQLMIA RMTVAVGEAG
GIAPSISMVS DLYPPHRRSL AISVLMIGPH LGLLAAMVAG GWIAQEYGWR SVFLFFGAPG
ILLALLLFCF TKDPGHGVYD KNTTLNNEKN KQESFFKQLK GIMKVKGFIW IAMGCALAGM
AGYGYGIWVP TFMVRNYDMS LAHAGISFGL AGGIFAAIGT IFSGVFCDKL SKRDSRWQIG
LPIIGILISL PMGVAFMLWP ADAFWMVGEI KIPHAIVFAA LFSFFNCWWP SLSYAAISHL
MTSSQRATGA ASLNLFLTLF GAGLGPLLTG TLSDVFGEIF AGEGLKYALV ATMMLLLVSA
WFYYKGLSPY QTRMKQLNND EVESIDNSVP PTTVNDPLPS T
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