| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2107 |
|---|
| Symbol | |
|---|
| ID | 5664755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 2553406 |
|---|
| End bp | 2553735 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641236709 |
|---|
| Product | DsrC family protein |
|---|
| Protein accession | YP_001501962 |
|---|
| Protein GI | 157961928 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2920] Dissimilatory sulfite reductase (desulfoviridin), gamma subunit |
|---|
| TIGRFAM ID | [TIGR03342] sulfur relay protein, TusE/DsrC/DsvC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000795282 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAT TTAACGGAAA ACAGATAGAA ACCGATCATC AAGGTTATTT GAAGTCGGTA
AATGATTGGA CTCCTGAGCT TGCTCCAGTT ATTGCCAAAG AAGAGCAGAT AGAGCTGAGC
GACGCTCATT GGGAAGTGAT TAACTTTGTT CGTGAATTCT ATTTAGAATT TAAGACCAGT
CCTGCGATCA GAGTGCTTGT AAAAGCGATG GGGCTAAAGC TTGGAGCTGA AAAAGGAAAC
TCTAAGTATC TTTACACCCT GTTCCCAGTC GGTCCTGCTA AACAGGCAAC TAAAATTGCA
GGCCTACCAA AACCTGCGAA GTGCATTTAG
|
|---|
| Protein sequence | MIEFNGKQIE TDHQGYLKSV NDWTPELAPV IAKEEQIELS DAHWEVINFV REFYLEFKTS
PAIRVLVKAM GLKLGAEKGN SKYLYTLFPV GPAKQATKIA GLPKPAKCI
|
|---|
| |