Gene Spea_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2080 
Symbol 
ID5662473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2519235 
End bp2520182 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content38% 
IMG OID641236675 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_001501935 
Protein GI157961901 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTG CGTATTGCTA TGAACATCAC CAAGTCACTG CTACAACTAT CAATATTAAA 
GAGTCTTTAC CTGAAACAGC ATTATGGCTG GATATATATC AACCCATTGA GGCTGAAAGG 
TTATGGTTAT CCAGCTTTTC CTCCGCTGAG GTGCCCGATA GGGAAGATAG AAATGAAATT 
GAGGCTTCTT CGCGCTTTTA CCAAAACAAA GATGGTTTAC ACGTAAACTC CTTATTTAGT 
CAAAAGTCTG GCCAGACGCT AAGCTCAGTT AATATTTACT TTAATCTTAG AAAGCAGTTA 
TTGATCACCA TTCGAGATGA TAATGAACGA TTATTAGACT CATTATTGAC CAGTCTGCAA 
AAAGAACCCA CTCCACAGAT CACACCACTG CAATTGTTCA TTCAGCTCTT CAAAATGAAA 
GTTGACCATC TAGCCGATCT TATTGAAGAG ATCTATAGCA CTCTGGAAAA TGTTGGCCAT 
GAAATATTTG AAAAAGATCA TATTGATAAG GTGTTTAAAC TGATCACAAA CAGGGAAGAC 
ACCAATGGAA AGATCCGCCT AAACCTACTC GATACTCAAC GTGCGCTGAA TTACATACTG 
CGTGATAACC AAATTGAACT GACTAACGAT GAGGCAAAAG ATATTAATAA TATGCTATCT 
GACATTGCAT CGTTAATACC ACATACTCAG TTTATTTTTG AAAAAATCAA CTTTTTAATG 
GATGCCGCCA TGGGTTTTAC CGGTTTGCAG CAGAATAAAA TTAGCAAAAT TTTTTCTATC 
ACGGCAATAG TTTTTCTCCC GCCAACATTA ATAGCAAGTA CCTATGGTAT GAACTTTGAG 
AATATACCAG AGGTACATTG GCACTATGGT TATCCATGGT CCATAGCACT AATGTTCGCC 
AGTGCAGCAG CCACATTTGG TTTTTTCAAA TTAAAGCGCT GGTTATAG
 
Protein sequence
MITAYCYEHH QVTATTINIK ESLPETALWL DIYQPIEAER LWLSSFSSAE VPDREDRNEI 
EASSRFYQNK DGLHVNSLFS QKSGQTLSSV NIYFNLRKQL LITIRDDNER LLDSLLTSLQ 
KEPTPQITPL QLFIQLFKMK VDHLADLIEE IYSTLENVGH EIFEKDHIDK VFKLITNRED 
TNGKIRLNLL DTQRALNYIL RDNQIELTND EAKDINNMLS DIASLIPHTQ FIFEKINFLM 
DAAMGFTGLQ QNKISKIFSI TAIVFLPPTL IASTYGMNFE NIPEVHWHYG YPWSIALMFA 
SAAATFGFFK LKRWL