Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2076 |
Symbol | |
ID | 5662469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2515616 |
End bp | 2516776 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236671 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_001501931 |
Protein GI | 157961897 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000100726 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAA TCCTGTTTCT GCTTCTTCCA ATAGCAGCCG GTTACGGTTG GTATATGGGA CGCAGAAGTG TCAGACAAAA GCAGACAAAT CAGCGAAAAC AGCTGAGCCG AGACTATTTT ACTGGGCTTA ACTTTCTGTT GTCTAATGAG TCAGATAAAG CCGTCGATCT GTTTATCAGT ATGCTTGATG TCGATGACGA TACTATCGAT ACCCATCTTT CTCTAGGCTC ACTATTTCGT AAGCGCGGTG AAGTAGACCG CTCGATCCGC ATTCATCAAA ACTTAATTGC TAGACCGAGT CTAACCACAG AGCAAAGAGA CATTGCTATG ATGGAGCTTG GCAAAGATTA TCTCGCTGCT GGTTTTTATG ATCGTGCAGA AGAGATCTTT ATCAATTTGG TCAATCAAGA TGACCACAGC GAAGAATCTG AGACTCAACT GATTGCGATA TACCAAGTGA CTAAAGATTG GCAGAAAGCC ATCGATATTA TCAAAAAGCT CAAGCGTAAG CGTCAGCATG AACTTAAACA CGACAGCGCC CATTTTTATT GTGAGTTGGC AAACGAAGCC GAAGATGATG CGCTTAAGCT TAAGAATTTA CAGTTAGCGA TTAAACAAGA TAGCCAGTGT GCTCGTGCCT TATTAACGCT CGCTGAGCAA TATTTGAAAC AAGAAGAATT CAAGTCTTGT AAACAAGCCA TTGAAAAACT GCTAACAACG GATATCGACC TAGTACCGGA TGCCTTGGCC ATTGCTAAAG AAGCATACTT GCTGACAAAC GACAGTACGG GTTATCAAGA GCTACTTAGA GAGGCGATTG AAAAGGGGGC TGGTGCAAGC GTCACCATTA CCCTTGCTCA GCACATGATT GAGCAAGGCC ACCCGAAGGA TGCAGAGAAG TTAATTATGG AAGGTCTAAT AAGACACCCA ACCATGAAGA GCTTTCAGCA CCTAATGAAG ATGCAATTAC TGCAAGCGGA AGAAGGGCAG GCAAAGAAGA GCTTATCGAT GCTAGAGCAG CTTGTAGAAC AACAAATTAA ATATCGACCA GGGTATCGCT GCCGAGAATG TGGCTTCCCA TCACACAGAT TATATTGGCA TTGCCCCTCC TGTAAGCATT GGGGCAGCAT TAAAAGGATC AGAGGTCTAG ACGGAGAGTA A
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Protein sequence | MLEILFLLLP IAAGYGWYMG RRSVRQKQTN QRKQLSRDYF TGLNFLLSNE SDKAVDLFIS MLDVDDDTID THLSLGSLFR KRGEVDRSIR IHQNLIARPS LTTEQRDIAM MELGKDYLAA GFYDRAEEIF INLVNQDDHS EESETQLIAI YQVTKDWQKA IDIIKKLKRK RQHELKHDSA HFYCELANEA EDDALKLKNL QLAIKQDSQC ARALLTLAEQ YLKQEEFKSC KQAIEKLLTT DIDLVPDALA IAKEAYLLTN DSTGYQELLR EAIEKGAGAS VTITLAQHMI EQGHPKDAEK LIMEGLIRHP TMKSFQHLMK MQLLQAEEGQ AKKSLSMLEQ LVEQQIKYRP GYRCRECGFP SHRLYWHCPS CKHWGSIKRI RGLDGE
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