| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2020 |
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| Symbol | |
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| ID | 5662413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2445845 |
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| End bp | 2446822 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641236615 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001501875 |
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| Protein GI | 157961841 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.243296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTCTA ATCAAGTTAT TTTCCTCGGC CTCGTTTTTA TCGCGGTACT TTTCTTGTCA
CAGGCTCTTT TTTTACCTGT ATATAGCCCA CAAAGGGCAA ATAGTGCATT GGTACGTAAA
CGTCTTAAGA AGCTTTCAGA AGAGTCTGGA GATATAACAT ATGAGACGTC ATTACTTCGC
AAGAGTCGCT TAGGGAAACT TGGGCCAATA GGGCGTTGGT TGGAGCATTT TCAATTTATT
GAAAATCTAA GTTACCGCCT TGAATTAGCA GATTACAAAC TCATGGGTCA TCAATATATC
ATGCTTGCTC TCTTTTCTGC TTCGGCAGTT GCGGTAATGG GCTGGTTATA TTTAGGGGAA
CTGGTTGCGG CCGCATTTAT GTTTTTCGTG ATGCTATTTT TATTTAATTT CAAGCTAAAT
AGAGATACTT CTAAGCGCAT GGATAAGATT GAAGAGAGCT TTCCTGATGC ATTAGATGTG
TTAAGGCGGG CGTTGCAAGC TGGTTATTCA TTCTCTGATG CTATTAAGCT AGTGACTGAA
GAGATGGATG GACCCTTGGC TAAGGAATTT AGCTTAATGT TTGCTAACAT TAATTACAGT
AAAGACACAA AAAGAGCGCT TTTGGGCTTC ATCGAGCGTG TTCCTAGTGT ATCGGCGATG
GCATTCGCCA GCGCAGTCAT GGTTCAAAAA GAAACCGGCG GTAATTTGGC CGAAAATATT
AATAACCTAG CTAGGGTCAT TCGCTTACGC TTTACTTTCA GACGAAGAGT GAGAACGCTA
TCTGCTGAGG GAAGACTTTC TGCCTGGATC TTAATTTTAC TGCCGTTTGT ATTATTTGCC
GTTATCTATA TCCAAACGCC TGGATACGTT GGTGAGCTAA CAGGCACAGA AGAGGGGAAT
CAATTGCTCA TCTGGGGGGC TATCGGTATG TTTGTCGGTG GCATGTGGAT TAGTAAGTTA
ATAAGGATAG ATATGTAA
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| Protein sequence | MFSNQVIFLG LVFIAVLFLS QALFLPVYSP QRANSALVRK RLKKLSEESG DITYETSLLR
KSRLGKLGPI GRWLEHFQFI ENLSYRLELA DYKLMGHQYI MLALFSASAV AVMGWLYLGE
LVAAAFMFFV MLFLFNFKLN RDTSKRMDKI EESFPDALDV LRRALQAGYS FSDAIKLVTE
EMDGPLAKEF SLMFANINYS KDTKRALLGF IERVPSVSAM AFASAVMVQK ETGGNLAENI
NNLARVIRLR FTFRRRVRTL SAEGRLSAWI LILLPFVLFA VIYIQTPGYV GELTGTEEGN
QLLIWGAIGM FVGGMWISKL IRIDM
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