Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2018 |
Symbol | |
ID | 5662411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2443277 |
End bp | 2444503 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641236613 |
Product | Flp pilus assembly protein ATPase CpaE-like protein |
Protein accession | YP_001501873 |
Protein GI | 157961839 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.724066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAC CCTTAGAGCT ATGTGTCTCG AATAATGACC AACAAATACC TATGACTTAT TGTTTACCTT TTCCTGTGCA AGCAGTTGTT GCAAGTAATG GAAGTCGAAC GCTTACTTGG CTAACGGAAA GTTTGAACCA GTTTGAAAAT TTAAAATGGC AGTCGTCAAC TTATGAGGAT GATCAATTAG CAAAAGAAAA AAATAGGTTT AATCTAGTGT TATTAGTCTT GCCTTCAGAT GAGTTGGAGG CTAAGAAAGC ATTATCCTAT GCGGCAAATT TTGACTGCGA CATTATTTTA ATCGGCTTTA ATACGCCACA GAATATTCTA AGATTAGCAT TTCAATATGA TGTTAGTGAT TTTATTCCTT CATCATCACC GTTACATGAA TTTTTTACTT CTTTAGAGAA AGTTTCTGAC CGACTCGTAA AGAATGCTGA GCTAGCTCCT GTGGTGGCTG TGATAAACGG CAAGGCTGGT TCTGGAGCAA GCTTTATATC CGCTAGTTTA GCCGACGTTG CCTCTCAAAG AGAAGGGAGC GATCTTGCAC TCCTGGATAT GGACCTTCAC CACGGCACTC TTTCACATAT TCTTGGCTAT GACGCTAAGT ATTCAATTTG TGATGTGATT GAAACTATCG AAGATCTAGA TGAGATCGCG TTAAAAAGCA CCATGACTAA GAAAGGAAAC CTTAGCCTAC TTGCTGCTAA GCCCTTCGAA CTTCTTACTT TAGATCAAGA TGTTGATTTT AGTCGTATTA ATGAACTGAT GTGGAAATAC CGTCAGTTCT ATAAGCAAGT TATTTTAGAC TTCTCTAGAG GACCTGAAGA TTGGAATTGT AATTTGTTAT TGAGTGCGAC AATTTTAGTT GTAACTCAAC AAAATATAAT GCACTTACGT CAAACCAAAG ACTTGATTAA TCAATTGACG ACAAGGATGG GGATTAATTC AAATCAGATA ACTTTGGTTG TAAATCGATA TAACAAAAAC TCGAATATAA AATTATCTGA TATCGAAGAA GCAATTGGAA TATCAAGCAT AAACACAGTC GTTAATGATT ATAAGTTATC GAACGAGTGT GTAGATTTAG GGAAACCGAT AACTCAAGTA GCAAAAAAGC ACAGAATAGT TACCGATGTA CGCTCTTTAG CGGATAGGTT TTTACCGATT AATAATGAAC AAAATAAAAA AAGTACAAGT TTTTGGAAGC GACTTTTAGG AAACTAA
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Protein sequence | MDKPLELCVS NNDQQIPMTY CLPFPVQAVV ASNGSRTLTW LTESLNQFEN LKWQSSTYED DQLAKEKNRF NLVLLVLPSD ELEAKKALSY AANFDCDIIL IGFNTPQNIL RLAFQYDVSD FIPSSSPLHE FFTSLEKVSD RLVKNAELAP VVAVINGKAG SGASFISASL ADVASQREGS DLALLDMDLH HGTLSHILGY DAKYSICDVI ETIEDLDEIA LKSTMTKKGN LSLLAAKPFE LLTLDQDVDF SRINELMWKY RQFYKQVILD FSRGPEDWNC NLLLSATILV VTQQNIMHLR QTKDLINQLT TRMGINSNQI TLVVNRYNKN SNIKLSDIEE AIGISSINTV VNDYKLSNEC VDLGKPITQV AKKHRIVTDV RSLADRFLPI NNEQNKKSTS FWKRLLGN
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