| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1997 |
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| Symbol | |
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| ID | 5662390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2420055 |
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| End bp | 2421695 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236592 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001501852 |
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| Protein GI | 157961818 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.179465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCC TCTTAAGACA GTTTACAATT CTACAACGTC TAATTTTAAT GCTAATGCTA
GCCGCTATCG GTACCGTTTG CTTTGCCAGT TTTTCGATCA ATGAACAGTA CAACAACCTT
ATCGCTCAAA AATGGCTTCA AAACGATGCC CAAATCAACA CGGCCGTCAG CATTATCGAA
GCTCATAACA AACAAGTTGA AGATCTCAAC CTCACTCTCG TTAACGCCAA ACAAGCTGCA
GCTTATCTAA TTAATCAAAT ACATTTTGGC AACGATGGCT ATTTCATCAT ATTAGATGAA
CAGCGCAATA TTATCGCCCA CGGCGCCGAC GCTAGTGCCA TTAACCAAAA TGCCACCACA
CTCTTTAGTT CTCAAGACCC CGTCAACCTC GAGACTTTAG TTAGCGCAGC TGCCCATCAA
CCTGTTGCCA AGTCGCAAAT TAACTTCCCC AATCCGAGTA GCGGTCAGTT GGAGCCCAAG
CTCGTTGAAG CCAGACAATA CGCCCCCTGG GACTGGACTA TTATTACTGG CAGCTATATG
AGCGATGTGA GTGATGTGAT GTATTCGATG GCTTTCGATT ACCTCGCAAT CATGTTGATG
ATCTCAATTC CCATCTTTCT TTTTTTCCTA GTGCTTAACA TTTCCATAAC CGCCCCGCTA
AAAGAAGCGA TTACGGCGAT GAAAGACATA GCGCAAGGAG AAGGTGATTT AACCCAAAAG
CTGCCAACAA AAGGCAAAGA TGAAGTAGCA GAATTGGCCC AAGCCTTCAA TTTATTTGTG
TTGAAAATTA GGGATATGGT CGCCCAGCTA CAACCAATAG GCCAAAGTTT GGATAAAGAT
GCTATCGGGT TACTCACTGC AGTTGAGGAG TCAAACAGTA GTGTCGAGCA TCTACACCAA
CAAACGTCAA GCGTAGCGAC GGCAATTAAC CAGATGCTAT CGACGACTCA AGAAATGGCC
ACCAGTACCA ACCAAGCAGC TGATGCCGCG AATAGCGTAA AGCACCAAGC TCAGCAAAGT
ATGTCAATGA TGGACTCGAC ACTCGACAAT GTGCAGCATC TTGCAGATGA GCTACAGCAT
GCTCAGCAGC TCACCCATGC CCTTGGTCAA TCATCGCTAC AGATAGGCAG TATCCTTGAT
GTGATCCGCG CAATAGCCGA ACAAACCAAT CTACTTGCCC TCAATGCCGC TATCGAAGCT
GCGCGTGCGG GAGCTCATGG CCGCGGTTTT GCCGTCGTAG CCGATGAGGT GCGTGCCTTA
GCGACACGTA CACAAGACTC CACCAACGAA ATTCAAAATA TCATCAAAGA TATTCAATCG
GGCGTAAATC TTGTGGTGGC CAGTAACGAG CAAAATCAAC ATCAATCACA ACAAGTCCAG
ACCCAAGCAA AGGATGTCAG CGATTCATTG GCCGATATCC TTAACTTAAT TGCTCATATC
AGTGATATGA ATACCCAACT CGCCAGTGCA ACCGAAGAGC AATCGATTGT CACAGAGGAG
ATCAATCGCA ACATTTGCAC CATTACAGAA TTAACAGAAG TGTCGGTAAA AGCTAATGAA
AGTAACCACA GTGCAGCGAT TTCTCTTCAA TCGATCAGTA AAGACTGCTC GCAAACATTA
GGCCAGTTTA AAGTTAACTA G
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| Protein sequence | MIALLRQFTI LQRLILMLML AAIGTVCFAS FSINEQYNNL IAQKWLQNDA QINTAVSIIE
AHNKQVEDLN LTLVNAKQAA AYLINQIHFG NDGYFIILDE QRNIIAHGAD ASAINQNATT
LFSSQDPVNL ETLVSAAAHQ PVAKSQINFP NPSSGQLEPK LVEARQYAPW DWTIITGSYM
SDVSDVMYSM AFDYLAIMLM ISIPIFLFFL VLNISITAPL KEAITAMKDI AQGEGDLTQK
LPTKGKDEVA ELAQAFNLFV LKIRDMVAQL QPIGQSLDKD AIGLLTAVEE SNSSVEHLHQ
QTSSVATAIN QMLSTTQEMA TSTNQAADAA NSVKHQAQQS MSMMDSTLDN VQHLADELQH
AQQLTHALGQ SSLQIGSILD VIRAIAEQTN LLALNAAIEA ARAGAHGRGF AVVADEVRAL
ATRTQDSTNE IQNIIKDIQS GVNLVVASNE QNQHQSQQVQ TQAKDVSDSL ADILNLIAHI
SDMNTQLASA TEEQSIVTEE INRNICTITE LTEVSVKANE SNHSAAISLQ SISKDCSQTL
GQFKVN
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