Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1973 |
Symbol | |
ID | 5662367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2398405 |
End bp | 2399514 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641236570 |
Product | hypothetical protein |
Protein accession | YP_001501830 |
Protein GI | 157961796 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0953876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCTG TTTTAAGCCG TTGGTATAAA GACCGTTTTA GTGATCCGCA AGCTGTAACC TTAATGCTTA TCTTAATGGG CTTTGCCCTC GCAATCTACT TTGCTGGTGG CTTATTAGCA CCTCTATTGA TTGCACTTGT ACTGGCATTT TTATTGGAAT GGCCCGTAGC CCAAATGGCT CGAATAGGCA TCAACCGCAC CACTGCCGCT TCATTAGTTC TTGTACTGTT TATCGGTTTA ATGCTGTTAA TTAGTTTTGG CCTCGTACCG AGTGTTTGGC GTCAAGGAGT GAGCTTGATG GCCGATTTGC CGAGTATGAT CGACAAAGGG CTCCATACCG CTCAACTTTA TATTAATAAA TATCCCCAGT TTGTGAATCC AAGTCAGCTA GATACCATGG TTGCGGAGCT TAAGAAGATG TTAGATACCC AACATCTACT CGATATTGGT AAACAGCTCT TAGGATATTC AGCCTCATTA TTGGTGCTGA TGGTCTACGT GATTCTAATC CCCTTGCTAG TTTTCTTCTT TTTAAAAGAT AAAGATGAAT TGATTAAAGG CAGTAAGCGT TTCTTTCCCA CTAACAGAGA TTTAGCTCGT AAAGTATGGA ATGAGATGCA CCAACAGATC TTTAATTACA TCCGAGGCAA AATAATCGAG ATAGTTATCA TAGGTGTGGC CAGCTATATT TTCTTTGCCT TGATGGACTT GCGCTATGCA GCCTTGTTGG GAGTGTTAAC CGGATTGTCT GTGTTAATCC CCTATGTCGG TGCCACACTT GTGACACTCC CTATCGCACT CGTGGCATTT GTTCAGTGGG GCTTTAGTCC TGAATTTGGT TACCTTATGG TGGGGTACGG CATCATCCAA GCATTAGATG GTAATGTGCT AGTGCCACTT CTATTCTCCG ATGCGGTCGA TTTGCACCCT GTATTCATTA TTGCCGCAGT GCTGATATTT GGCGGGTTAT GGGGGGTATG GGGAGTCTTT TTTGCGATTC CATTAGCCTC ATTAGTTAAG GCCGTTATTA ATGCCTGGCC GGTACCCAAT AATCCAGATG AACAGAAAAT TGAAGCATCA GACAATAAAG CGTTACCCGA AGTGAAATAG
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Protein sequence | MLSVLSRWYK DRFSDPQAVT LMLILMGFAL AIYFAGGLLA PLLIALVLAF LLEWPVAQMA RIGINRTTAA SLVLVLFIGL MLLISFGLVP SVWRQGVSLM ADLPSMIDKG LHTAQLYINK YPQFVNPSQL DTMVAELKKM LDTQHLLDIG KQLLGYSASL LVLMVYVILI PLLVFFFLKD KDELIKGSKR FFPTNRDLAR KVWNEMHQQI FNYIRGKIIE IVIIGVASYI FFALMDLRYA ALLGVLTGLS VLIPYVGATL VTLPIALVAF VQWGFSPEFG YLMVGYGIIQ ALDGNVLVPL LFSDAVDLHP VFIIAAVLIF GGLWGVWGVF FAIPLASLVK AVINAWPVPN NPDEQKIEAS DNKALPEVK
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