| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1967 |
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| Symbol | |
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| ID | 5662361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2392797 |
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| End bp | 2393507 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236564 |
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| Product | DNA replication initiation factor |
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| Protein accession | YP_001501824 |
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| Protein GI | 157961790 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0187389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAGTCAA ACTCTCCTTT ACAATTATCA CTGCCAGTTC ATCTACCTGA TGATGAAACC
TTCAATAGTT ATTATCCTGC TACGGGTAAT GATGAGCTTA TTCAAAGTTT ACAAGAGTGC
GCGGAAGGCA AATCTAATGG GGCTGTGTTT TTGTGGGGTC CTGAAAAATC AGGACGCACC
CACCTTATGC ATGCTGCCTG CGCTCACGCC AATGATCTTG GTCGAAGTAG TTTTTATATT
CCACTGGGGA TCCATGCGAG TATTTCTACC GCCTTATTAG AAGGCCTAGA AAAATTGGAT
TTAGTCTGTA TCGATGATGT CGATGCGATT GCTGGCCACC CATTATGGGA AGAGGCGATA
TTTGATCTCT ATAATCGAAT TTCAGAACAA AAGACCTGTT CGCTCGTCGT TAGTGCGAGT
GTATCACCGA GTGATAGTGG TTTTTCTTTG CCAGATCTTG TCTCTCGCAT GCAGTGGGGG
CTTAATTATC AGCTGCAGCC TATGGCTGAT GAAGAAAAGC TTGCTGCGCT ACAACGCCGA
GCTGCGATGC GAGGCTTACA ACTACCAGAA GATGTAGGAC GTTTTCTACT GAATCGTTTG
GCTAGAGATC TAAGAACTCT GTTTGATGTT TTGGATAGGC TCGATAAAGC TTCCATGGTT
CATCAACGTA AACTGACTAT TCCATTTATT AAAGAAATGC TGCGCCTCTA A
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| Protein sequence | MKSNSPLQLS LPVHLPDDET FNSYYPATGN DELIQSLQEC AEGKSNGAVF LWGPEKSGRT
HLMHAACAHA NDLGRSSFYI PLGIHASIST ALLEGLEKLD LVCIDDVDAI AGHPLWEEAI
FDLYNRISEQ KTCSLVVSAS VSPSDSGFSL PDLVSRMQWG LNYQLQPMAD EEKLAALQRR
AAMRGLQLPE DVGRFLLNRL ARDLRTLFDV LDRLDKASMV HQRKLTIPFI KEMLRL
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