Gene Spea_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1959 
Symbol 
ID5662353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2383547 
End bp2383834 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content43% 
IMG OID641236556 
Product50S ribosomal protein L25 
Protein accessionYP_001501816 
Protein GI157961782 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.763998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTACA CTATCGCTGC ACAAGTTCGT ACTGAAATCG GGAAAGGTTC GAGCCGCCGC 
CTACGCCATG CGAAAAAAGT ACCTGCTGTT ATCTACGGTC CAGGTAAAGA AGCTATCTCT
ATTGTTTTTG ATCACAAAGA CATCATCAAC ATCCAAGAGA ACCAAGATTT TTACACTTCT
GAGCTAACTA TCGCTCTAGA AGGTAAAGAT GTTAAAGTTC GCGTTCAAGA CATGCAACGC
CACGCGTTCA AGCCAATGAT CGAACACGTT GACTTCAAAT TTGCTTAA
 
Protein sequence
MSYTIAAQVR TEIGKGSSRR LRHAKKVPAV IYGPGKEAIS IVFDHKDIIN IQENQDFYTS 
ELTIALEGKD VKVRVQDMQR HAFKPMIEHV DFKFA