Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1955 |
Symbol | |
ID | 5662349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2379066 |
End bp | 2379614 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641236549 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_001501812 |
Protein GI | 157961778 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000663803 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGTTTA ACATTCCTAT TGCGTTAACA CTTTTCAGGT TAGCTCTGCT TCCTGTTTTT GTTGTACTTT TTTACATACC AGAACCCTGG TCTCCTTTTG CCGCTGCATT TGTCTTCTGG CTCGCAGCTG TTACTGACGC ACTAGATGGT TATGCCGCGC GAAAGTTAAA GCAATCGACA CGTTTTGGTG CTTTTCTTGA TCCCGTTGCC GATAAGATCA TGGTAACAAC GGCATTAGTC TTACTTATTT CTGAATACAG TAATATTTGG TTGACTCTGC CAGCTTTATT TATGATTGGC CGCGAAATCG TTATCTCAGC ATTGCGAGAA TGGATGGCTG AAATAGGCAA ACGTGGTGCG GTTGCTGTCT CTTGGATTGG TAAGTATAAA ACTGCGGCAC AGATGGTGGC TATCACTGGC TTAATTTGGC AGCCAAACGA GTTTTTAACT TATGCTGCTT TCGGACTGTT CTATGTTGCA GCTGTACTGA CATTTTGGTC AATGATGAGT TATATAATGG CCGCGTGGAA GGATTTAACA GCAGAATAG
|
Protein sequence | MPFNIPIALT LFRLALLPVF VVLFYIPEPW SPFAAAFVFW LAAVTDALDG YAARKLKQST RFGAFLDPVA DKIMVTTALV LLISEYSNIW LTLPALFMIG REIVISALRE WMAEIGKRGA VAVSWIGKYK TAAQMVAITG LIWQPNEFLT YAAFGLFYVA AVLTFWSMMS YIMAAWKDLT AE
|
| |