| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1948 |
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| Symbol | |
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| ID | 5662342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2369338 |
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| End bp | 2371275 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236541 |
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| Product | ABC transporter ATPase component |
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| Protein accession | YP_001501805 |
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| Protein GI | 157961771 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000765701 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTCTCG TACGTATTAA TAACGGCTCT TTAGCCTACG GTTATACCCC ATTATTGCAA
AAAGCGGATT TTACCATTGA ACCCGGTGAG CGTGTTTGTA TCGTAGGCCG TAATGGCGCT
GGTAAGTCAA GTTTGATGAA AGTGTTAAGT GGTGACGTAC TGCTTGATGA AGGTGAGTTT
AACATTGCAA CTGACGTTAA AGTAAGTCGT TTGCAACAAG ATCCACCTAA AGCAGAGCAG
GGTACTGTGT ATGCGTATAT TGCAGCAGGC CTGCAAGAGG TCGGTGAAAA GTTAGAGCGT
TATCATCAGC TTTCTCATGA TTTAGCCACA GCCTCTCCAG ATGAAATGGA GCGTATGCTT
AAGCAGATGG AGCGTCTTCA AGATGATATC GATCATCTTA ATGGCTGGCA GCTTGATAAC
CGAATTAATC AAAACTGTGA ATTACTCGGC TTAGACGCTG ATGCTGCATT ATCGGAATTA
TCTGGTGGTT GGCAACGTAA AGTGGCACTG GCGCGCTCTT TAGTAAGCGA TCCAGATCTA
TTGCTGCTTG ATGAACCGAC CAACCATTTA GATATCGACA CGATTGAATG GTTAGAACAA
TTTTTATTAA GTTACCGTGG TGCTATCGTG TTTGTCAGTC ACGACCGTGG CTTTATTCAA
CGCATGGCGA CACGAATCGT CGATCTTGAC CGTGGTGTGG TGACTTCTTG GCCTGGTAAC
TACCAAACTT ACCTAGACGG TAAGGCTGAG TGGCTACGTG TTGAAGCTGA GCAAAATGCC
CACTTCGATA AAAAGTTAGC AGAAGAAGAG GCTTGGATCC GTCAAGGCGT AAAAGCTCGA
CGTACTCGTA ACGAAGGTCG CGTTCGCGCT CTTAAAGATC TGCGTGTAGA GCGTATGGCT
CGTCTTAATC GCCAAGGTGG CGCAAAGATG GCCGTTGCCG ATACAGATCG CTCGGGTAAA
TTAGTATTCG ATATTGAAAA TCTTGAATAC AACCTACCTG AGAAAAATTT AGTTAAGAAC
TTTAGTTCAA CGGTTATGCG TGGTGACCGT ATAGCGCTGA TTGGTCCTAA CGGCTGTGGT
AAATCAACTC TTGTTAAATT ATTGATTGGT CAGCTAGAAG CACAATCGGG TAGCGTAAAA
GTGGGTACCA AACTTGAAAT TGCCTATTTT GACCAATATC GTGAAGCGCT AGATCCAGAA
AAGACGGTTG AAGATAACGT TGGCGAAGGC AAGAAGACGG TAACTATCAA TGGTCAAGAT
CGCCATATCT TGAGCTATTT ACAGGACTTT TTGTTCTCAC CTATGCGAGC AAGAACGCCT
GTTAAGGCGC TGTCTGGCGG TGAAAAGAAT CGTCTGTTGT TAGCACGCTT ATTATTAAGA
CCTGCAAACC TTATTATTCT TGATGAGCCA ACCAACGATC TTGATATTGA GACCCTAGAG
TTGTTAGAGT CACTACTAGC GGATTACAAA GGTACGCTAT TACTCGTCAG CCACGACCGT
GCATTTATCG ATAATACAGT AACCAGTAGT TGGTGGTTTA CCGGTAATGG CGGCTGGAGC
GAGTATGTGG GTGGTTATGA GGATGCGGTT TCTCAAGGGG CAAGATTTTA CTCTGAGGAA
CCTCAAGCAA CAAATGCTGT CCAAGCAACA AATGCTGTCC AAGCAACTAT TGTGGAAGCT
CAACCAGTAG TACAAGCAGC TGAGAAGAAA GTAGAAAAGA AGCTTTCTTA CAAATTACAA
CGTGAATTAG AGTCTCTGCC CGCTTTAATG GAGCAGTTAG AGCAAGATAT TGAAGCACTG
CAAACTGTTG TTAGCTCACC CGAGTTTTAT GCTCAGGAGC AAAAAATAGT GAATGAAAAC
TTGAAAGCAT TGTCCGATAA GGAAAGCGAG CTTGAGAGTT GCTTTGAGCG ATGGGAAGAG
CTCGAATCAT TGAAGTAA
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| Protein sequence | MSLVRINNGS LAYGYTPLLQ KADFTIEPGE RVCIVGRNGA GKSSLMKVLS GDVLLDEGEF
NIATDVKVSR LQQDPPKAEQ GTVYAYIAAG LQEVGEKLER YHQLSHDLAT ASPDEMERML
KQMERLQDDI DHLNGWQLDN RINQNCELLG LDADAALSEL SGGWQRKVAL ARSLVSDPDL
LLLDEPTNHL DIDTIEWLEQ FLLSYRGAIV FVSHDRGFIQ RMATRIVDLD RGVVTSWPGN
YQTYLDGKAE WLRVEAEQNA HFDKKLAEEE AWIRQGVKAR RTRNEGRVRA LKDLRVERMA
RLNRQGGAKM AVADTDRSGK LVFDIENLEY NLPEKNLVKN FSSTVMRGDR IALIGPNGCG
KSTLVKLLIG QLEAQSGSVK VGTKLEIAYF DQYREALDPE KTVEDNVGEG KKTVTINGQD
RHILSYLQDF LFSPMRARTP VKALSGGEKN RLLLARLLLR PANLIILDEP TNDLDIETLE
LLESLLADYK GTLLLVSHDR AFIDNTVTSS WWFTGNGGWS EYVGGYEDAV SQGARFYSEE
PQATNAVQAT NAVQATIVEA QPVVQAAEKK VEKKLSYKLQ RELESLPALM EQLEQDIEAL
QTVVSSPEFY AQEQKIVNEN LKALSDKESE LESCFERWEE LESLK
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