Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1942 |
Symbol | |
ID | 5662336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2358150 |
End bp | 2362994 |
Gene Length | 4845 bp |
Protein Length | 1614 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641236531 |
Product | NAD-glutamate dehydrogenase |
Protein accession | YP_001501799 |
Protein GI | 157961765 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTTGA AAGATGCAAT GCCTTCAGTA CTGCTCGAAA ACGTAGTCAA CCTAATTCAC TCTAAAGTAC CCAATTCACA AGCTAAGCAA GTTGAGCAGT TCGCAACTTG CCTCTATGCG CATATGTCGA AAGACGATCT GAATGCGCGT AACGACAGTG ACCTCTATGG CGCTGTTTTG AGTCAATGGA ACGCACTGAA TAAGACCTCC GTCGGGGAAG GTCATATCAG AGTCTTCAAC CCGAGCCAGT CTAAGCATGG CTGGCAATCA AGCCACTCGA TTATTGAAAT TATTCAACCA GACATGCCTT TCCTAGTCGA TTCAGTTGGC ATGGCGATTA ACCGTTTGGG CATTAAGGCA CATATGATGC TGCACACGCC GATGGTTATA GAGCGTCAAG ACGGTGTGGT AACTCATGTT AGTTATAGTT CAGATAAACA AGAAAACGTC GACAAGGTTG CTGTTTTTCT AATTGAGATT GACCGTCAAA GTAGCGATGA CGATATTAAG TCACTTACGA AAGAGATTGA GTCAGTGATT GGAGATGTCG CTGCTGCAGT TAATGACTGG GAAGCAATGT CGGCCAAGCT TGGCGAAACC ATCAACGAGT TAGAAAATCG TCCTTACCCC GGTACTAAGG AAGAGCTAAA TGAAGCGAAA AACTTCTTAT CTTACCTAAA CGACCATCAC CTTACATTAC TTGGCTATCG CCGTTATGAC TTGCATAAAG TCGAGGGTGA TTTAGAGTTG GTCGCCGATA AATCGACTAG TCTAGGCTTG ATGGCTAAAT CAAGTAAAAC CAAAACTGAA ACAGGTCTTC TCCTGTCAAC TTTTTCAGAG AATGCACGTA AAGAGGCGCT AGATAAAAGC CTATTGGTGT TGACTAAGAG TAGTGAGAAA AGCCGCGTTC ATCGTCCTGC CTATGTGGAT TATATCGGTG TTAAACGCTT CGATGAGCAG GGTAACGTTA TTGGTGAAGA TAGATTTATC GGTTTGTATG CCTCAAATCT GTATAACCGT AGTCCTCGTG AAATTCCTTT ACTTGCGCAA AAAGTGCAAC GGGTATTAGA CCGTTCAGGT CTAGCACCTC GCTCTCATGA CTATAAAGCT TTAATGCATA TCCTCGAGAC TCTACCACGA GATGAGTTGA TCCAAGCCAG TGTTACACAG CTTGCATCAA TCGCTCACGG TGTACTTGAG ATGCAAGATC GTGACAAGCT GAAATTGTTT GTTCGTAAAG ATGGCTTTGG CAGATTCTTC TCTTGCTTAG TTTATGTATC AAAAGATAGA TATAACACTA AGTTACGTGA AGATACCCAG CGTATCCTTG CGCAGCATTT CAATAGTAGT GAAGACGTGG AGTTCACCAC ATATTTCTCA GAGTCTACTT TGGCAAGAAC CCATTACATC ATCAAAGTTG ACAATAATAG TATGGACGTC GATGTGGCAG CGATTGAGAA TAATTTGACC GAAGCGGCTC GCTCTTGGGA AGACAAGCTT GCTAGTGCAG TGTTTAGCGC TCAAGGCGAA GAGCTAGGAA ATAGCCTGAT TAAGCGTTAT GTGGATGCAT TTCCACGTAG CTATAAAGAA GATGTTCTGC CTAGTTCTGC AGTTGTCGAT ATTCAGCATC TTGAAGAGCT TGATGATGAC CATAAATTGG GTATGTTGTT CTATCAACCA CAAGAAACAG CGTTAAACGA CAATAAGGTT CGTCTAAAGT TATTCCACAA AGATGAACCT ATCCATCTTT CAGACGTGTT GCCAATGCTT GAAAACTTCG GTCTTCGAGT AATTAATGAA AGACCTTATG AAGTTAAAAC TGTCGAAGGT GCCACATATT GGATCCTAGA CTTTTTGATG ACAACCCAAA GTGTGGCATC AGATGATCTT GCTGACAGCC AGGAGCGTTT CCAAACTGCG TTGTCACAGG TGTGGAAGAA AGAGCTAGAA GATGATGGTT TTAACCGTTT AGTTCTCTCA ACTGGCCTAA CGGGCCGCGA AGTGTCAGTA CTTCGTGCTT ATGCTAAATA TATGCGTCAA ATCGACTCTA CATTTAGCCA AGCCTATATT GAAGAGACTT TCTCAAGTTA TCCGCAAATT GCTGATCTGC TTGTTAAAAT GTACATTCGC AAGTTCAACC CTAAGTTGAA AACGCGTACG TTAAACAAGT TCATTGAACA AATAGATCTT CGTCTTGATG ATGTTTCTAG CTTAGATGAT GACAGAATTA TTCGTCGTTA TCTTGATTTG ATTAATGCAA CTAACCGTAC CAACTTCTAT CAGCTGGCAG AATCAGGCTT GCCAAAATCA TATATCTCGT TCAAATTTGA ACCTGAATTG ATCCCTGAAA TGCCAAAGCC ACTGCCTAAA TATGAAATCT TCGTTTACTC TCCACGTGTA GAAGGCGTAC ACCTTCGTGG TGGTAAAGTC GCTCGTGGTG GCCTGCGTTG GTCAGACAGA CGAGAGGACT TCCGTACAGA AGTGTTAGGT CTTGTTAAAG CGCAGCAAGT TAAGAATACG GTAATTGTTC CTGTAGGAGC AAAAGGTGGT TTCGTATGTA AGCAACTGCC TACAGACGGT GGACGTGAAG CTTTCTTCGC GGAAGGACAA GAATGCTACC GCTTATTTAT TCGCGGTTTA CTCGATATCA GTGACAACAT TATCAATGGT GAGGTCATTG CTCCTGAAAA TGTAGTAAGA CACGATGAGG ACGACCCATA TCTTGTTGTT GCTGCCGATA AAGGGACTGC AACTTTCTCT GATATCGCCA ATGAAATTGC AATCGAATAT AACTTCTGGT TAGGCGATGC ATTCGCTTCG GGTGGCAGTA ACGGTTATGA CCACAAGAAG ATGGGTATTA CCGCACGTGG TGCATGGGAG TCTGTTAAAC GTCACTTCCG TGAAATGGGC GTTAACTGTC AAACTACTGA TTTTACCTGT TTAGCCGTCG GAGATATGGC CGGTGATGTC TTTGGTAATG GTATGTTATT GTCGAAACAT ACCCGACTAG TCGCAGCCTT TAACCACATG CATATCTTCA TCGACCCAAA TCCAGATGCC GCGACCAGTT ATGTGGAACG TGAGCGTTTG TTTGCGCTGC CACGCTCTAG CTGGGAGGAT TACAACAAAG AGCTCATTTC TAAAGGTGGT GGTATCTTCT TACGCTCAGC GAAGTCGATT CCATTGTCAG CAGAAATGAA GAAGATGTTG GGAAGCCAAA AAGCTTCTAT GCCACCGCTT GAGCTGCTAA AAGAACTACT TAAGATGCAA GTGGATCTTA TCTGGAACGG CGGTATTGGT ACTTATGTTA AGGCGACCAC TGAATCACAT GCAGAAGTTG GTGATCGCGC TAATGACGCA ATTCGTGTAA ATGGCAATGA AGTCAAAGCC AAGATTATTG GTGAAGGTGG TAACTTAGGT TGTACCCAGC TAGGTCGTAT TGAATACTGC GCTAATGGTG GGCGCATGAA CACTGACTTC GTTGACAACG TGGGTGGTGT TGACTGTTCA GATAACGAAG TAAACATTAA AATTTTGCTT AATGCGTTAG TCGCAGATGG TGAGATGACA GTTAAGCAGC GTAATCGTCT GCTTGAAGAG ATGACGGATG AAGTGAGCCG TATCGTTCTT CAAGACTGTA AAGATCAAAC CAGAACGATT TCAGTCACGC AAGTACGTGG CGCTGAGCAG CTTAAAGAGC AGATTCGATT CATTCATTAT CTTGAGAAAG AGGGCAAGCT TGATAGAGCA CTAGAGTTCT TACCAAATGA AGATGAATTA GCCGACCGTT TAGTTAATGG TAAATCGCTG ACACGACCAG AATTATCGGT GTTAGTTGCT TACGCTAAGA TGGTATTAAA AGAGCAGCTA TTAACTTCAG AAATTACTGA AGATAGCTTC TTAAGTCAGC TATTAATTGA ATACTTCCCT AAGCAGTTAC AAGAGAAGTA CATCGATAAT ATGGCATCGC ATCCGCTACG TGGTGAAATT ATTGCTACTT CTTTGGCCAA TGAGTTGGTC AATGATATGG GACTTAATTT CGTGCAACGT ATGCAAGATG AGACAGGTGC CTCAGTAGCG GAAGCTACCA TTTGTTATAC TATGGCACGC GAAGTGTTTG GTTTAGCTGA TTTAACCAAA TCTATTACTG ATTTGAATGG CGTTATTCCA GCTGTTGTAC AGTGTGAAAT GCTGCATCAG TTACGTCGCA ATATTCGTCG TGCGAGTCGT TGGTTCCTAC GCCACCGCAA CCGTAACTTG AATATTGAAC AGACAATCGA GTTCTTTAAA CCTGTGTTTG ATGATTTGAA AGTAAGCGTG CATCAATACA TGGTTAATGA GGAAGTTGAA GGAATTCGCG CAGAGTCGAA TGCATTAATT AAAGAAGGGG TACCTGAAGA TGTTGCCATG GTTGTGGCAA ATGTCAGTAC CTTGTTCTCG GCATTAGATA TCGCACAAAT ATGTGATCTT GAAGGTAAGC CAGTTCCGTT AGTCGCTGAA ACGTACTTTA AGCTAGGTGC AAGTGTCGAT CTACATTGGT TCCTTGAACA GATTAGCGCA CAACCTGTTT CGAACCATTG GCAAGCACTG GCTAGAGCCG CCTTTAGGGA AGAGCTTGAT TGGCAGCAGC GTTCACTCAG CTCTGTCGTA TTGAGAACTT GTACGGAAAC CTGTGATGCG AACAAGATCA TATCAGAATG GATTGAGTCG AATCAGAGCC TATTGGAACG TTGGTTCCAT ATGCTAGCTG ACTTTAAGAC TTCGCAAAGC CATGAGTTTG CAAAGTTCTC TGTAGCCTTA CGTGAACTTA ATCTTTTGAT CCTTCATTGT GAAGGTCAAA AGTAA
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Protein sequence | MALKDAMPSV LLENVVNLIH SKVPNSQAKQ VEQFATCLYA HMSKDDLNAR NDSDLYGAVL SQWNALNKTS VGEGHIRVFN PSQSKHGWQS SHSIIEIIQP DMPFLVDSVG MAINRLGIKA HMMLHTPMVI ERQDGVVTHV SYSSDKQENV DKVAVFLIEI DRQSSDDDIK SLTKEIESVI GDVAAAVNDW EAMSAKLGET INELENRPYP GTKEELNEAK NFLSYLNDHH LTLLGYRRYD LHKVEGDLEL VADKSTSLGL MAKSSKTKTE TGLLLSTFSE NARKEALDKS LLVLTKSSEK SRVHRPAYVD YIGVKRFDEQ GNVIGEDRFI GLYASNLYNR SPREIPLLAQ KVQRVLDRSG LAPRSHDYKA LMHILETLPR DELIQASVTQ LASIAHGVLE MQDRDKLKLF VRKDGFGRFF SCLVYVSKDR YNTKLREDTQ RILAQHFNSS EDVEFTTYFS ESTLARTHYI IKVDNNSMDV DVAAIENNLT EAARSWEDKL ASAVFSAQGE ELGNSLIKRY VDAFPRSYKE DVLPSSAVVD IQHLEELDDD HKLGMLFYQP QETALNDNKV RLKLFHKDEP IHLSDVLPML ENFGLRVINE RPYEVKTVEG ATYWILDFLM TTQSVASDDL ADSQERFQTA LSQVWKKELE DDGFNRLVLS TGLTGREVSV LRAYAKYMRQ IDSTFSQAYI EETFSSYPQI ADLLVKMYIR KFNPKLKTRT LNKFIEQIDL RLDDVSSLDD DRIIRRYLDL INATNRTNFY QLAESGLPKS YISFKFEPEL IPEMPKPLPK YEIFVYSPRV EGVHLRGGKV ARGGLRWSDR REDFRTEVLG LVKAQQVKNT VIVPVGAKGG FVCKQLPTDG GREAFFAEGQ ECYRLFIRGL LDISDNIING EVIAPENVVR HDEDDPYLVV AADKGTATFS DIANEIAIEY NFWLGDAFAS GGSNGYDHKK MGITARGAWE SVKRHFREMG VNCQTTDFTC LAVGDMAGDV FGNGMLLSKH TRLVAAFNHM HIFIDPNPDA ATSYVERERL FALPRSSWED YNKELISKGG GIFLRSAKSI PLSAEMKKML GSQKASMPPL ELLKELLKMQ VDLIWNGGIG TYVKATTESH AEVGDRANDA IRVNGNEVKA KIIGEGGNLG CTQLGRIEYC ANGGRMNTDF VDNVGGVDCS DNEVNIKILL NALVADGEMT VKQRNRLLEE MTDEVSRIVL QDCKDQTRTI SVTQVRGAEQ LKEQIRFIHY LEKEGKLDRA LEFLPNEDEL ADRLVNGKSL TRPELSVLVA YAKMVLKEQL LTSEITEDSF LSQLLIEYFP KQLQEKYIDN MASHPLRGEI IATSLANELV NDMGLNFVQR MQDETGASVA EATICYTMAR EVFGLADLTK SITDLNGVIP AVVQCEMLHQ LRRNIRRASR WFLRHRNRNL NIEQTIEFFK PVFDDLKVSV HQYMVNEEVE GIRAESNALI KEGVPEDVAM VVANVSTLFS ALDIAQICDL EGKPVPLVAE TYFKLGASVD LHWFLEQISA QPVSNHWQAL ARAAFREELD WQQRSLSSVV LRTCTETCDA NKIISEWIES NQSLLERWFH MLADFKTSQS HEFAKFSVAL RELNLLILHC EGQK
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