Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1904 |
Symbol | |
ID | 5662298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2314764 |
End bp | 2315954 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641236493 |
Product | lytic murein transglycosylase |
Protein accession | YP_001501761 |
Protein GI | 157961727 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000413322 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTAAAAT CAATCCCCCT GGCTACAGCG CTAATCCTAT CTACTTCTGC TGCTTATGCG GCAGACGAGC AGCCTAATTG GGCTAGCTGC GTGGCCGAGC TACAACAAAC GGCAAAAGCA GAAGGTCTAT CTCAACAGAC CATAGAGACC ACGTTGGCCA ATGTTAAGTA CGTGCCGAGA GTGATTGAAC TCGATCAAAA ACAACCTGAA TTTAGCACGT CTTTTGAAAA TTATTTTAGT AAGCGGGTAA CAGATTGGCG AGTGGAGCAG GGGCGTAAGC TCTATAGTGA GCACAAAGTA TTGTTACAAA AACTGGCAAA AGAATATGGC GTGCCGCCTC AGTACCTGCT TGCATTCTGG GGACTAGAAA CTAATTTTGG CTCTTATAAG GGCAAGATGT CGGTATTAGA TTCATTGGCA ACCTTGGCTT GCGATCCAAG GCGCAGTCGT TATTTCACCA CTGAGTTGAT GCAAGCATTA AAGCTTAAAG AGCGATACAA CTTTGATGAA GCTGATATGG TCGGGTCTTG GGCTGGTGCC ATGGGACACA CTCAATTTAT GCCGTCGGCC TATGCAAAAT ACGCTGTGGA TGGCAATGGT GATGGTAAAG CAGACCTGTG GAACAGTACC GAAGATGCTT TAACCTCTGC GGCTAACTTC TTACAAAATC TAGGTTGGAA ACGCAATGAA CGTTGGGGGC GAGAAGTCAC CTTACCGGAA AACTTCTCAT ACGCGCACTT AGGCAAAGCC GAGTCTCAGC CGCTTACTCG TTGGGCAGAG CTGGGGATCA CACAAACCAA TGGTGCACCG TTAAGTACGC CAGATATGCA AGCTGCACTT TACCTGCCGT CGGGTCATAC GGGCCCCGCA TTTTTAGGTT ATGACAACTT TGATGTGATC ATGCGCTGGA ATCGCTCAAC CTTTTACGCC ATCGCAGTAG GTCACCTTGC CGACAGAATC AATGGCGCTG TAGCGCTAAA AGTGACACCA CCTAAGATGC CAAACTTGAG TCGTGCTCGA GTTAAAGAGC TGCAAAACCA GCTGAACCAT TTAGGTTATG ATGTGGGTAA GGCCGATGGC ATTTTGGGCT CAAAGTCGGT TAAAGGCTTA CAGAGCTTCC AAAAGAGTCA GGGGCTTGTT GCCGACGGCT ACCCGGATGA AGCGACGTTT AAGGCGCTAA AGGTTAAGTA A
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Protein sequence | MLKSIPLATA LILSTSAAYA ADEQPNWASC VAELQQTAKA EGLSQQTIET TLANVKYVPR VIELDQKQPE FSTSFENYFS KRVTDWRVEQ GRKLYSEHKV LLQKLAKEYG VPPQYLLAFW GLETNFGSYK GKMSVLDSLA TLACDPRRSR YFTTELMQAL KLKERYNFDE ADMVGSWAGA MGHTQFMPSA YAKYAVDGNG DGKADLWNST EDALTSAANF LQNLGWKRNE RWGREVTLPE NFSYAHLGKA ESQPLTRWAE LGITQTNGAP LSTPDMQAAL YLPSGHTGPA FLGYDNFDVI MRWNRSTFYA IAVGHLADRI NGAVALKVTP PKMPNLSRAR VKELQNQLNH LGYDVGKADG ILGSKSVKGL QSFQKSQGLV ADGYPDEATF KALKVK
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