| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1891 |
|---|
| Symbol | |
|---|
| ID | 5662285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 2299645 |
|---|
| End bp | 2299851 |
|---|
| Gene Length | 207 bp |
|---|
| Protein Length | 68 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641236480 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001501748 |
|---|
| Protein GI | 157961714 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.810852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACT TAGCAATCCA ATTTGGCTTC AATTTACGAA AAAAACGCAA AGAGTTGGGA
ATGTCTCAAG ATAAATTGGC GCTTTTAGCT GAAATAGATC GCAGTTATGG GGGGAGAATC
GAGCGCGGAG AAGTCAATAT CACGTTAGAA AAAGCTTATC AGCTCGCTGA GGTATTAGAA
TGTGACGTCA GAGAGTTACT TCCATAA
|
|---|
| Protein sequence | MKDLAIQFGF NLRKKRKELG MSQDKLALLA EIDRSYGGRI ERGEVNITLE KAYQLAEVLE
CDVRELLP
|
|---|
| |