| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1879 |
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| Symbol | |
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| ID | 5662274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2289976 |
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| End bp | 2290767 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236469 |
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| Product | ABC transporter |
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| Protein accession | YP_001501737 |
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| Protein GI | 157961703 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATCTCGG GTATAAGGCT GTTAAAGAAG TGCAGAGCAG TTTCAGTTAG CTTTTGTAGA
AGGCTAGCAA GAGTTATCTT GTGCCTGTTT TTTATCCTCT TCTCTTGCAA TATACATGCA
GATACCCTGT ATTTAACTTC ATTGCATTGG CCGCCTTTCG CTGGAGAGCG GCTACAAAAT
CAGGGGGCTT GTATTGCTGT CACTAAGGCG GCACTCGAGG CTACTGGGCA TACTGTTGTC
GTTGACTTCT TTCCTTGGAG CCGTGCAGTA AGAATGGCGT CACGAAACGA TTCTAAATAC
TTAGGTTACC TTCCAGAATA TAGCTACCCC ACAGATAAGT TTGTTTTCTC CCAGCCTATG
GGGCGAAGTG TTTTAGGTCT GGTCGAACAA AAATCCTATC CTGTTAGCTG GACTCAGCAA
AGTGATTTGA ATCATTACAC CATTGGCGTG GTTCAAGGGT ACGTTAATAC CCATGAGCTT
GATGAGATGA TGACTCAAGG AAGCCAGCCA TATGAGGCCG TTGCATCAGA TCTACATAAC
CTGAATAAGG TCGCTACGGG GCGAATCGAT GCGGCGGTTA TTGATGAGCA TGTGCTGAAA
TATCTGCTCG CCCAGCCCAA TATGGCGCAT GTTAGGAATA AATTGCAGTT TAATAAGAAG
TTATTAACTT ACAAAGAGCT ATTCGTTGCG TTTAAAAATA ACAAAGAGGG ACGCATGTGG
CGAGACCGCT TCAATCAAGG ATTGGCTCAA ATAGACGTGC AACAGATCTT AGAACAAAAT
ATGCAACGCT AG
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| Protein sequence | MISGIRLLKK CRAVSVSFCR RLARVILCLF FILFSCNIHA DTLYLTSLHW PPFAGERLQN
QGACIAVTKA ALEATGHTVV VDFFPWSRAV RMASRNDSKY LGYLPEYSYP TDKFVFSQPM
GRSVLGLVEQ KSYPVSWTQQ SDLNHYTIGV VQGYVNTHEL DEMMTQGSQP YEAVASDLHN
LNKVATGRID AAVIDEHVLK YLLAQPNMAH VRNKLQFNKK LLTYKELFVA FKNNKEGRMW
RDRFNQGLAQ IDVQQILEQN MQR
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