Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1872 |
Symbol | |
ID | 5662267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2281416 |
End bp | 2283173 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641236462 |
Product | hypothetical protein |
Protein accession | YP_001501730 |
Protein GI | 157961696 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTAA TAATTGGGCC AAATAACTCT GGGAAATCTA ATTTAGCCAA ATATTTTTAT TACTTAAAAA GTATAGCGTC GGAAGAATTA TCTAAAGGTG GGGCCATTTC AGTGGCAACT GAACTTGATG AAAGTCAGAC ATGGAGTTGG AAAAAAGAAA AAATAGCCTG CGAGATTTTA CTTTCAAGCG ATAATGCATT TATAGATGAA TCTAAGGCTT CATATAAAGT AAGTGAGCAT CAGATTGCTC TTTCTTGTTG TCATGATGTT ATCGCAAACA CATCAGTTTT AAACATGAAG GTTGGAGGGA AACCAATTTT CAATGACAGT AATTTAATTT GTTCTGATCT AGAGAGCGAA AAGTGGGTTG ACCCAACCGA CGACATAGCA GGGTTTAACG ATAACAATTT TTATTGGAAT CATTTCTTAA ACTCAATGGT ATTTGTTGAT CCAATTCGTC ACCACTCTAG AAATTCAGAT AATTCTCAAA GCTACTATTT TGATGGTGCC TTAATCATTA AGGAGCTTAA CAAGCTAAGA GTTGATAAAG CAAACCCGTC ATATTGGGCT GGTTATAAAA AACAAATTAA AGATTGGTTA ACCGACATAC TATCTGAAGT GGTAATTAAT ATCGACATTG TTGAAAATGA ATTACGTCTT GAGTTTCAAT CAGGCTTAAC CTTTTCACTC GATGAGTTAG GAACAGGTGT TTCTCAAATT GTAATGTTGC TTTCACACCT TTGGATCAAT AAAGATGTTC ATTTAAATGT CTTTTTAGAA GAACCAGAAG CTAACTTGCA TCCTGAATCA GTGGTTAAAC TTGTCAATAT ATTCGAAAAA GAATTAGTGA ACCATAGGTT TTTTATCACT ACTCACTCAC CTTCGCTAAT TGACTGTATT AATGATAACT GGGCTGTGTA CAGAACTTTA AAATCACAAA ATGGGGCAAG TTCAATTACC CCAAATGACA ATATAATCAA ACACTACGAA ACATTAGATG CGTTGGGAGT AAAAGCATCT CAAATCCTTC AAGCCAATAC CGTACTCTGG GTTGAAGGAC CCAGTGACAG AATTTATTTG AAAAAGTTGA TTGATATATT TTCAGATGGT GAATTGCAAG AGGGGAAAGA CTATTCCTTC TTATATTTTG GAGGTACAAA CCTAGCATCT TTCACTGTTC TTGATGATTT GGATCAGAAT CTGATCAATA TTTTAAGCAC AAGCAGAAAA GCTTATTTGA TAACTGATTC TGATTGTTCT TCACAAACAA GCCGAGATAG CGAGACTTTT AAAACTTATT TAAGCTCTAT GCTAGGTAGA GTTCAAGCTG CTAATGCTGA CAATACAGGT TTAGATTCAT CTGTAGAAGA TTATGTAAAA GTTTGGATTA CGGAAGGTCG TGAAATTGAA AATTATATCT GTAAGGACTT GTTATTTGGG GTTTTAACGG AGCAAGGATT CAAACGTGAG TCGATCGGTA AAGGTGAAGA ACGAAAGGAG CTGGAATTAA CTATTACTCA ATCATCTGAT TTTATTTTTG AAAAGTTTAA TTCATTCGAC AAAGCTATTT CCGATTATTA TCAATATCAA GATCAAACTC TGCTTGATGA ATCGACAATT AAAAACATCG CTTTAAGTTA TGCAAATAAG AAAGTTCCGA TTGCGAAAGC AATAGTTAAA AAATTAACAA AGACTCATTG CTCAATACTT GATCTAGAAA GTCAGATGGA ACATTTGGTT GCGTTTATTA ATAAATAA
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Protein sequence | MNLIIGPNNS GKSNLAKYFY YLKSIASEEL SKGGAISVAT ELDESQTWSW KKEKIACEIL LSSDNAFIDE SKASYKVSEH QIALSCCHDV IANTSVLNMK VGGKPIFNDS NLICSDLESE KWVDPTDDIA GFNDNNFYWN HFLNSMVFVD PIRHHSRNSD NSQSYYFDGA LIIKELNKLR VDKANPSYWA GYKKQIKDWL TDILSEVVIN IDIVENELRL EFQSGLTFSL DELGTGVSQI VMLLSHLWIN KDVHLNVFLE EPEANLHPES VVKLVNIFEK ELVNHRFFIT THSPSLIDCI NDNWAVYRTL KSQNGASSIT PNDNIIKHYE TLDALGVKAS QILQANTVLW VEGPSDRIYL KKLIDIFSDG ELQEGKDYSF LYFGGTNLAS FTVLDDLDQN LINILSTSRK AYLITDSDCS SQTSRDSETF KTYLSSMLGR VQAANADNTG LDSSVEDYVK VWITEGREIE NYICKDLLFG VLTEQGFKRE SIGKGEERKE LELTITQSSD FIFEKFNSFD KAISDYYQYQ DQTLLDESTI KNIALSYANK KVPIAKAIVK KLTKTHCSIL DLESQMEHLV AFINK
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